Gene Sfri_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1413 
Symbol 
ID4277911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1685316 
End bp1685924 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID638134187 
Producthypothetical protein 
Protein accessionYP_750103 
Protein GI114562590 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0598562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCA ATATCATTAC CGTTATTTTA GCCGCTGGTG CCAGTAGCCG ATTTCATGGC 
GCCAAAATGC TCGCTAAAGT AAAAGGTAAT CAAAGTTTAT TAGCCCGCAG CATCGTATCA 
CTTAACAAGG TGACAGCCAC CGCAGGAATA AAAGCGCCAG CAGTAGTGTT AGGCGCTCAT 
CTTAATGACG AGATCATGGC AATAACCGCA ACAAGCCATC AGATCATTAA CCCTGATTGG 
CAACAAGGGT TATCCAGCTC CGTTAAACAT GCCAGCCAAT ACGCTATTGA ACAGCAAGCC 
GATGCATTGT TGCTCGTGCT TGCTGACCAA GTCGCCATTG ATGTTGATGA CTACTTACAC 
CTTATCGAAC GCTATCAGCA AAATGGGTTA ACAAGCTGTG CTTTTTATCG ACAAGATGTG 
GGTGTTCCTG CAATATTTTT AGCTAAAGAT TTTGCTGTGC TAATGTCGAT CGATGGCGAT 
AAAGGTGCTA AAAGTATTCT AAAACAACAT GATAAAAATA ATAGCTTGAA CATTATTTCA 
ATGGAACAAG CGCAATTTGA TATTGATACA CCTGCTGACT TAGCGCGTTG GTTAGATAAT 
AAGGATTAA
 
Protein sequence
MKPNIITVIL AAGASSRFHG AKMLAKVKGN QSLLARSIVS LNKVTATAGI KAPAVVLGAH 
LNDEIMAITA TSHQIINPDW QQGLSSSVKH ASQYAIEQQA DALLLVLADQ VAIDVDDYLH 
LIERYQQNGL TSCAFYRQDV GVPAIFLAKD FAVLMSIDGD KGAKSILKQH DKNNSLNIIS 
MEQAQFDIDT PADLARWLDN KD