| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1385 |
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| Symbol | |
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| ID | 4277008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1648331 |
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| End bp | 1650601 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134159 |
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| Product | hypothetical protein |
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| Protein accession | YP_750075 |
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| Protein GI | 114562562 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.444045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCC TAGAAAGACG TCAAAGTACT TTTCCTGGTA ACGAGCCTAA TCTATCAACA
ACGAAAGTGG AGCAGCTTAT CGATGTTAAA AAGCTGCTGT TGCCGTTATT ACGTTTTAAG
TGGCGCATAA TCGCGTTTGC GTTATTAGTG ACCGCGTTAA CGGTGTTTGT GGTGTTAAGT
ATGACGCCTA TTTTCAGTGC CACATCGACA CTGTTGATTG AGTCAGAACA AGCTAAAGCG
ATTAAAATTG ATGAAGTGTA TGGGATTAAT TCTGGTCAAC AAGAATATTA TTTAACCCAA
TTTGAAATTA TTAAGTCACG CAGTATTGCC GAGCGAGTTT TTAATGAGTT GGATTTAGTC
AATCATCCAG CCTTTAACCA GCCGCCCAGT TGGTTTGCTG AGCTTAAATC ACAGCTAAAT
TTTATTCCGC AAGAAGCGGC TACTGCTGCT GATAGCCAAA TTAGCCTAGA TATCGCTAAG
CATAAATTGA TTGATGATTT TGCCAAAAGT ATCAGCGTTT CTCCTGTGAG CAAAACCCAG
TTAGTCAATA TTAGTTACGA AAGTTCTGAC TCACAGCTTG CAGCGCAAGT CGCTAATGCA
GTGGGTGATA TTTATATTGT TAGTCAATTA GAAGCTAAAT TGGGCATGAC CCAAAAAGTT
AATGTGTGGT TAGGCGGCCG TTTAGAAGAT TTACGCTTAA AGCTGGATCA GTCTGAATAT
AAATTAGAGC GTTTTAAAGT TGAAAATGGC TTAATTGACG TAGAAGGTGT GACTGCATTA
GACGCCAAAG AGTTAGAGCG ATTAAGTGAC GAAATTACTA TGGCAAGATC GCGTAAGGCA
CAAGCCGACA GTTTTATGGC AGTGGTGAAA CGCTATGGTG CCACTGACAT TAGCCGTCTT
GAAAGTTTGC CTGAGGTGAC TTCACATCAA TCGATACAAA ACGTAAAACG TGAAGTGGTG
TTGGTTGAAC GTAAAGTGTC TGAGCTAGAG CAAGTATATG GCCCTAAGCA TCCTAAAATG
ATTGCTGCAC AAGCTGAGCT GAACACAGTA CAACAAAATT TGCATAAGCA GATTAGCCGT
TTAGTGCAAG GCATAGAAGA TGAAGCTCAA ACTGCTGGGC AAACATTGCA AGCGTTAGAA
GCGCAATTTG GTAACGCTAA AGGCGCGTTT CAAAATTTGA GCACTAAAGA CACCGATTAT
CAACGCCTAT TACGTGAAGT CGATACCAAC AGACAGTTAT TTGATACGTT TTTAGCTCGC
CAAAAAGAAA CTGCCGTTAC AGGTGATTTT GACTCGCCCG TGGCACGTTT TACCGACCGA
GCCGTAGTCC CATTGCTGCC AGAAAAACCT AAAAAGAAAG TGATTATTAT TTTAGCCTTT
ATGGCCAGTT TAGGTTTTGC CATGGTGTTG GTGCTAATAC TAGATGCATT AAACGACACC
ATTAAAACCA GTGATGATGT TGAAAAACTA TTATCACAAC GGGCTCTCGG TTATGTGCCT
AAAGCTAAAA AAGGCACTAG TTATGAAGAG ATAAACTTTG CTTTTTACGA TGCGAGTTTA
CCTTTACATG CAGAGGCAGT AAGGACTATA CGAACATCAA TGTCATTAAT GGCCATGGGC
ACTTCGCTAT CGACCATTGA AGTGACGTCC TCCAATCCGA ATGAAGGTAA AACCACCACT
TCAATGAATA TAGCATTTGC TTATGCCACT ATGGAAAAAG TGTTAATTAT TGATGCGGAT
TTACGCAAAT CAAGCTTAGG AATGCGCTTT GGTTTACCGA CTTACCAGCC AGGGCTTGCC
AATGTGTTGT CGGGTACCGA CAGTTTACAT AACAGTATTG TAAAAGAGGT TAAACCTAAC
GTTGATGTGA TGCCTGCTGG TGCAGTGCCG TTAAATCCGC AAGAGTTACT AACATCTCGT
CATTTTGCAG AACTGTTGAC TGAACTGAAA ACTCAATACG GTAAAATTAT TATCGATACC
CCACCGGTTC ATGCGGTGAG TGATGCACTC ATTATCACCT CGTTGTGCGA TGCTACTGTA
CTAGTAGTCA AAGCTGGTCA TACTCGTAGC GAAGCGGTTA AGATGACATT AGCTAAGTTA
AACCAGGCGC GCAGTAAAGT GTTTGGAGTA GTGTTAAATC AATTCAACAC TAAAGATGCT
CAGCGCTACC AAGGTGATTA TGGTTACTAC CAGGCCTATG GTGCCGACTA TGCCATCAAA
CAGCCTGCTG GTAACAGTAA AGCAAAGAGT AAGGAAAACA CCAAGGCATG A
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| Protein sequence | MSFLERRQST FPGNEPNLST TKVEQLIDVK KLLLPLLRFK WRIIAFALLV TALTVFVVLS
MTPIFSATST LLIESEQAKA IKIDEVYGIN SGQQEYYLTQ FEIIKSRSIA ERVFNELDLV
NHPAFNQPPS WFAELKSQLN FIPQEAATAA DSQISLDIAK HKLIDDFAKS ISVSPVSKTQ
LVNISYESSD SQLAAQVANA VGDIYIVSQL EAKLGMTQKV NVWLGGRLED LRLKLDQSEY
KLERFKVENG LIDVEGVTAL DAKELERLSD EITMARSRKA QADSFMAVVK RYGATDISRL
ESLPEVTSHQ SIQNVKREVV LVERKVSELE QVYGPKHPKM IAAQAELNTV QQNLHKQISR
LVQGIEDEAQ TAGQTLQALE AQFGNAKGAF QNLSTKDTDY QRLLREVDTN RQLFDTFLAR
QKETAVTGDF DSPVARFTDR AVVPLLPEKP KKKVIIILAF MASLGFAMVL VLILDALNDT
IKTSDDVEKL LSQRALGYVP KAKKGTSYEE INFAFYDASL PLHAEAVRTI RTSMSLMAMG
TSLSTIEVTS SNPNEGKTTT SMNIAFAYAT MEKVLIIDAD LRKSSLGMRF GLPTYQPGLA
NVLSGTDSLH NSIVKEVKPN VDVMPAGAVP LNPQELLTSR HFAELLTELK TQYGKIIIDT
PPVHAVSDAL IITSLCDATV LVVKAGHTRS EAVKMTLAKL NQARSKVFGV VLNQFNTKDA
QRYQGDYGYY QAYGADYAIK QPAGNSKAKS KENTKA
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