| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1379 |
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| Symbol | |
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| ID | 4277003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1640999 |
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| End bp | 1641892 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638134154 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_750070 |
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| Protein GI | 114562557 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.264212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACT CTCAACATAC AATAGTTCGC GCTTTGGAAT CTATTGAAGT TCAGAGTGTT
TTACCTGAGG TTGTCATTAT TATTGATGAT GGTTCAAAGG ACCAATCAAT TAGTGTTGTA
CAGGCGTACA AGCGTGATTC ATCGCTAAAT ATAAAGATTT TGACACAAAA TAATTCTGGT
CCATCTTCAG CTAGAAATAA AGGAATAAAT GCAGCGTCTG AATTTTTAAT TTCTTTTTTA
GATGCTGATG ATGAATGGCA TCCTCTTAAA ATTGAGAAAC AGTTAGAGTT TTTTTTGAAA
AAAAGTCAAA CATCACAAGT TGGGTTGGTT GAATGTTATA TGACGGATGT TTGCGGAGAC
ATTGAAATCA AGCGAAATAC TCCAACACTT TCTGGACATC ATTTTCCTGA CTTTATATCC
TCTAATGTGA TTAAAGGAAC GCCTTGTGTA ATGGTTCCTA AACATATTTT AGAATCTTAT
GGTGGCTTTG ATGAATCATT ACGTTTTTCC GAAGACCGTA TGCTTTGGAG CCTTATAGCT
GCTGATTATG AAATATTTAC CGTACCTGAA TTTTTGGTTA TACGCCACTT TGGTTATGAA
GGAAATATCA CAAATAATCC TGCCAAAAAT TATAAATATA AAAAAGAGTT TATCAAAAAA
TTTATATCTC AATTTTCGAA TAGTCTAAGT AAAAAAGACA TAATTGAATT TAAGCTATCA
AATATGTATG ATTTTATGAC CGTTTTTTAT AAGAAAAAGG ATTATCATAA TTGTGTTGAA
TGCTATACAG ATATGATAAG TACTTCATAT TCTACATTAT ATTATAAACG GTTTTACCCG
CTTATTAAAT TTTTGGTTTC GTATGTTATG ACTGTTATTA AAAGTGAGAA GTAA
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| Protein sequence | MYNSQHTIVR ALESIEVQSV LPEVVIIIDD GSKDQSISVV QAYKRDSSLN IKILTQNNSG
PSSARNKGIN AASEFLISFL DADDEWHPLK IEKQLEFFLK KSQTSQVGLV ECYMTDVCGD
IEIKRNTPTL SGHHFPDFIS SNVIKGTPCV MVPKHILESY GGFDESLRFS EDRMLWSLIA
ADYEIFTVPE FLVIRHFGYE GNITNNPAKN YKYKKEFIKK FISQFSNSLS KKDIIEFKLS
NMYDFMTVFY KKKDYHNCVE CYTDMISTSY STLYYKRFYP LIKFLVSYVM TVIKSEK
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