Gene Sfri_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1361 
Symbol 
ID4276968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1619423 
End bp1620004 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content42% 
IMG OID638134136 
Producthypothetical protein 
Protein accessionYP_750052 
Protein GI114562539 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CCCTTACTCG TGGTTTAACC AATTTATTGC CTATGGTGTT GTCTATCTGG 
CTGTTTTGGT CACTGTTTAT CTCACTAGAT GGCTTAGGTA AATTATTGCT TGATATCGTG 
GGGGTAAAAG CGGCTTTTGT TGGCGCAGGC TTTTGTTTGG TGGCGGGTTT AGTGTTTGTT 
GCGGGGTTAC TATTTTCAGT TAGCCCGATT GCTTGGGTTT ACGGTTGGAT TGAAAACCAA 
CTGATGAAGT TTCCTTTGTT TAAATCTGTT TATGGCAGTA TCCGTGATAT CGCCAGTTTA 
ATGAACCGTG ACGGCCAACC TAAAACTCAA AAAACGGTAT TAGTCAAACA AGCCAATGGC 
AGTTTTGTTG TGGGTTTTAT CATGAGTGAC TCAGCGCCAC AGCCTCTTGC AGATGCATTG 
CCAGAAGGTG ATTGGGTGCC AGTATTATTC CAACTCAGTT ACCAAATCGC AGGGGTGACC 
AGTTTGGTTA AACGCGACGA CCTTATTTTT GTCGACTGGT CATTTGAAGA TGCGATGCGT 
TTTAATTTAA CCGCTGGGAT ATCTAACAGT AAAGAAGCTT AA
 
Protein sequence
MKNTLTRGLT NLLPMVLSIW LFWSLFISLD GLGKLLLDIV GVKAAFVGAG FCLVAGLVFV 
AGLLFSVSPI AWVYGWIENQ LMKFPLFKSV YGSIRDIASL MNRDGQPKTQ KTVLVKQANG 
SFVVGFIMSD SAPQPLADAL PEGDWVPVLF QLSYQIAGVT SLVKRDDLIF VDWSFEDAMR 
FNLTAGISNS KEA