| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1347 |
|---|
| Symbol | |
|---|
| ID | 4277881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1602228 |
|---|
| End bp | 1603148 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638134122 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_750038 |
|---|
| Protein GI | 114562525 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATT CAACACCGTA TCCAATTGGT ACACCAGGTC AAAAATGGAC CGACGCAGAC
AAAGAACAAT GGTTGGCACA AGTTGCCATA AAGCGCTCAT ATCAAGATGA AGTAGTGAGT
AAACTGGCTC AGATTAATGG TCCGTTTGAA CAGGTACAAT ACGGCGCATT ATCTTATGAC
GCTAATAAAT ATCCACTGTT TGCTTTTAAA TCTCAGCAAT GGGATAGCAA TAAAAAAACC
ATTCTGGTGA CTGGTGGAGT ACATGGTTAT GAAACGAGCG GCGTACATGG TGCTATTCAG
TTTTTAGCCA CTAAAGCACA GGATTATACT CAGTATTTTA ATGTGGCCAT CGCGCCGTGT
GTTAGCCCGT GGGGTTATGA GACCGTTAAC CGTTGGAATC CTAAAGCCAT CGATCCTAAT
CGCTCTTTTT ATGCTAATAG TCCTGCAGAA GAGTCTGCCG CGCTGATGGC ATTTGTGGCA
AGTTTGGGAG ATGTATATGC CCATATCGAT TTACATGAAA CGACTGACAC TGATGAGTTA
GAGTTTAGAC CTTTGCTGTC TGCACGTGAT GGCGTTGAAT ACGATAAAGG CATTATCCCT
GATGGTTTCT ATTTAGTCGG CGACAGTGAT AACCCAACTC CAGCCTTCCA AAAAGCAGTG
ATTGATTCTG TGGCTAAAGT AACTCACATT GCGCCTGACG ACAATGGACA GTTAATTGAA
GTGCCGATAG AGCAATTTGG GGTGATTAAT TACCCGGTTA AAAAGCTCAG TTTATGTGCC
GGGATTACTG ACAATCACTT CAATACCACT ACTGAGGTTT ATCCGGACAG TCCACACGTG
ACAGCACAAG AATGTAACGA TGCTCAAGTT GCTGCCATTA CTGGTGGATT AGATTACATA
GTGGCTTATT TAGAACTGTA A
|
|---|
| Protein sequence | MSNSTPYPIG TPGQKWTDAD KEQWLAQVAI KRSYQDEVVS KLAQINGPFE QVQYGALSYD
ANKYPLFAFK SQQWDSNKKT ILVTGGVHGY ETSGVHGAIQ FLATKAQDYT QYFNVAIAPC
VSPWGYETVN RWNPKAIDPN RSFYANSPAE ESAALMAFVA SLGDVYAHID LHETTDTDEL
EFRPLLSARD GVEYDKGIIP DGFYLVGDSD NPTPAFQKAV IDSVAKVTHI APDDNGQLIE
VPIEQFGVIN YPVKKLSLCA GITDNHFNTT TEVYPDSPHV TAQECNDAQV AAITGGLDYI
VAYLEL
|
|---|
| |