Gene Sfri_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1333 
Symbol 
ID4278007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1587002 
End bp1587604 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID638134108 
Producthypothetical protein 
Protein accessionYP_750024 
Protein GI114562511 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00042166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATTG ATCAGTTACA ACAAGGACAG GCTAAACGAT TGTCTTTGTT GTGGCTGTGG 
TTGCAACAAG ATGAAACCAG ACTGGCTGCG TTAATGGTGT GCCAGAAAGT GATGCAACAA 
CAAGGGATCA CCGACTGGTT AATTAGCGCG GGTTTTATAC GCAATTTGAT TTGGGATAAT 
TTGCACAGCA TGACCTCACA GCCCTTAAAC GACATTGATG TCATTTACTG GCGTGATAAC 
AACCCATCTT CTGCAGAAGA CCAGGCGATT GAAGCTTTAC TCGTTAAGCA GATAGCTCTG 
CCATGGTCGG TGAAAAATCA AGCCAGAATG CACCTTAGAA ATGGTGATAT GCCCTATATT 
TCTTGTGCTG ATGCCATGTC ATTTTGGCCA GAAAAACAGA CGGCTATTGG AGTGAAATTA 
GCTTCAATTG ATGACCTAAC ATCCGCTGAG TTTCAATTAC AGGTGACGAG TGTGTTTGGG 
TTATCCTGTT TGTTTGATTT GTCGTTAAGT CCAAATCCAA AGCGTGACAA GGCTATTTTT 
AATCATCGCG TGTCCCAAAA GGGATGGTTA ATACATTACT CCAAACTATT GGTTACAGAA 
TAG
 
Protein sequence
MAIDQLQQGQ AKRLSLLWLW LQQDETRLAA LMVCQKVMQQ QGITDWLISA GFIRNLIWDN 
LHSMTSQPLN DIDVIYWRDN NPSSAEDQAI EALLVKQIAL PWSVKNQARM HLRNGDMPYI 
SCADAMSFWP EKQTAIGVKL ASIDDLTSAE FQLQVTSVFG LSCLFDLSLS PNPKRDKAIF 
NHRVSQKGWL IHYSKLLVTE