Gene Sfri_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1321 
Symbol 
ID4277383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1576326 
End bp1577231 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID638134096 
Productfructokinase 
Protein accessionYP_750012 
Protein GI114562499 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGCA TGGGCGTCGA TCTCGGTGGT ACAAAAATTG AAATAGTGGC TTTAGCCGAT 
GATGGATCTG AAATATTCAG AAAGCGCATT CCAACGCCAA AAAACTATCC TGGTACCATA
GAAGCGATTG TCAGCTTAGT GGCTGATGCA GAATCAGAAA CGGGTCAAAC CGGCTCTGTT
GGTGTTGGCA TTCCAGGTGT TGTGTCACCG TTTACTGGCT TGGTAAAAAA TTCAAATTCA
ACGTGGATTA ACGGCCATCC GCTTGATAAA GATTTAAGTG AAGTATTAAA CCGTGAAGTA
CGCGTTGCCA ACGATGCTAA CTGTTTTGCA GTCTCTGAAG CCGTTGATGG CGCAGCCGCT
GGTAAAGGGG TTGTGTTTGG CGGCATTATT GGTACCGGTT GTGGTGCTGG TATTGCGATT
AATGGCCGTG TACATGGCGG CGGTAATGGC ATTGGCGGCG AGTGGGGACA TAACCCATTA
CCGTGGATGA CAGCAGATGA GTTTAATACC ACTACTTGTT TTTGTGGTAA TCGTGACTGT
ATTGAAACCT TTATTTCTGG CACAGGCTTT GTCCGTGATT TTCGTGAAGC GGGTGGCGAT
GCCACCAGTG GTATTCAAAT TTCTGAGATG ATGCAACAGG GCGATCCATT AGCCACAGCG
GCATTTGAAC GCTACATTGA TCGTCTAGCG CGTTCACTCG CACACGTGAT TAATATGATG
GATCCAGACA TGATTGTATT AGGTGGCGGT GTATCAAACA TCGAAGCTAT TTATACTGAA
TTGCCTAAAG TGTTACCCAA GTATGTTGTG GGCCGTGAAT GTGGTACCCA AGTGGTTAAA
AATAAGTTTG GCGCATCATC TGGTGTTCGC GGTGCTGCAT GGTTGTGGGG CAAAGACGAG
AAGTAG
 
Protein sequence
MMRMGVDLGG TKIEIVALAD DGSEIFRKRI PTPKNYPGTI EAIVSLVADA ESETGQTGSV 
GVGIPGVVSP FTGLVKNSNS TWINGHPLDK DLSEVLNREV RVANDANCFA VSEAVDGAAA
GKGVVFGGII GTGCGAGIAI NGRVHGGGNG IGGEWGHNPL PWMTADEFNT TTCFCGNRDC
IETFISGTGF VRDFREAGGD ATSGIQISEM MQQGDPLATA AFERYIDRLA RSLAHVINMM
DPDMIVLGGG VSNIEAIYTE LPKVLPKYVV GRECGTQVVK NKFGASSGVR GAAWLWGKDE
K