| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1310 |
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| Symbol | |
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| ID | 4277372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1558499 |
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| End bp | 1559518 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134085 |
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| Product | transcription factor jumonji domain-containing protein |
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| Protein accession | YP_750001 |
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| Protein GI | 114562488 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCGG CCAATACTCA GCACGTCGAA CACATCAATG AATGTACATT AGAGAGTGTC
ATTGATTTAA TCCGTGATGC CGACAAACCT ATGGTATTTA AGGGGTTGTG TCACCATTGG
CCGTTAGTCC AGGCAGGATT AGAGTCAGCA CAAAGCGCGA TGACTTACCT GCGCCAGTTT
TATCAAGGCA TGCCTGTTAC CGCATATTAT GTCCCGCCAG AACAACACGG TAGAGTGTTT
TACAATGAAC AACTTGATGG TTTTAATTAT CAAGCTGGCC GATTGGACTT TAATCAACTG
CTTGACCGAT TAAGCCAAGA AATGATTAAA GACATGCCTG CCGGAATGTA CATGGGCTCG
ACCGACATTC ACCAATGTTT ACCCGGTTTA GGGGCACAAA ACAGTTTAGA TTTAGCGCCC
ATGCAACCCT TAACCAGTAT TTGGTTGGGC AATCAAACCA AGGTCGCTGC TCATTATGAC
TTTCCGCTAA ACCTAGCGTG TAACGTGGTC GGAAAACGTA CCTTTACCCT ATTTCCACCC
GAACAAATTA GTAATTTGTA TGTTGGCCCA ATGGAACTGG CACCCGGTGG CCAAGACATC
AGTCTCGTTG ATATGGCGAA CCCCGACTTT GAACGTTTCC CGCGTTTTCA GCACGCATTA
GACGCCAGCC TAACAGCAGA GCTAAGCCCT GGTGATGTGT TATTTATTCC CAGCATGTGG
TGGCACCATG TTCGCGGCGT CGATGATTTT AACGTACTCA TTACCCACTG GTGGCGCGAT
ACTCCTGGCT TTTTAGGCCG CCCTAACAAT GCCTTATTGC ACAGCATATT AAGCTTACGC
TCTCTGCCTA AAGCTCAGCG CCAAGCATGG AAATCGATAT TTGAACACTA CATTTTCGAT
CATGACGATG TCGATGACAG TCATATTCCC GACAATGTGA AAGGCATGCA AACTAAGCCA
TTAGACGAAT TAACGGCCCG CAAAATACGC GCAGACTTAA TCAATAAATT AAAACGATAA
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| Protein sequence | MTAANTQHVE HINECTLESV IDLIRDADKP MVFKGLCHHW PLVQAGLESA QSAMTYLRQF
YQGMPVTAYY VPPEQHGRVF YNEQLDGFNY QAGRLDFNQL LDRLSQEMIK DMPAGMYMGS
TDIHQCLPGL GAQNSLDLAP MQPLTSIWLG NQTKVAAHYD FPLNLACNVV GKRTFTLFPP
EQISNLYVGP MELAPGGQDI SLVDMANPDF ERFPRFQHAL DASLTAELSP GDVLFIPSMW
WHHVRGVDDF NVLITHWWRD TPGFLGRPNN ALLHSILSLR SLPKAQRQAW KSIFEHYIFD
HDDVDDSHIP DNVKGMQTKP LDELTARKIR ADLINKLKR
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