Gene Sfri_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1297 
Symbol 
ID4278495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1539273 
End bp1539815 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID638134072 
Producthypothetical protein 
Protein accessionYP_749988 
Protein GI114562475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.539184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTT CTTTACGATA TGCGACGCGT CAAGCGCTTA ATAATCTCGC TAAACCAGTG 
GTATTAATCA GTGTGCTCAG TGGCGGTTTT TTAGCTGGTT GTAACTCAGA TGATGATGCG 
ATGACCATGG TTAAAAACAG TGCGCCAATG GTGAACAGTA TAATGCTCTC CACTGTGACT 
GAAACGCCGG TGACAGAACA ATTGATAGCC ACCGACAAAG ACGGTGATGC ACTAACGTTT 
ACTGTGATGA ATGAACCCAC GCTTGGTACG GTTAGCTTAA TGCCAAACGG CGAGTTTACT 
TATACTCCCG TCAATGAAGT GACTGGCATG GACAGTTTTA CCGTTGCTGT GACCGATGGG 
GTAAACGACC CTGTCGCGGC AATGGTGAAC ATTTCCATTG ATGCTGAGCA AGTGATGTTT 
TCAAGCTTAA GTCGTCAGGC ATTTTTACAA CCAAGCCAAG CTGCACCTAT ACGTATTAAT 
GGCCGCGTGG TTGAAGATGA TGTATCAACG GCTGATTTTT ACAACGACTT ATTACTAGAT 
TAA
 
Protein sequence
MNTSLRYATR QALNNLAKPV VLISVLSGGF LAGCNSDDDA MTMVKNSAPM VNSIMLSTVT 
ETPVTEQLIA TDKDGDALTF TVMNEPTLGT VSLMPNGEFT YTPVNEVTGM DSFTVAVTDG 
VNDPVAAMVN ISIDAEQVMF SSLSRQAFLQ PSQAAPIRIN GRVVEDDVST ADFYNDLLLD