Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1268 |
Symbol | |
ID | 4277400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1500501 |
End bp | 1503074 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134043 |
Product | PII uridylyl-transferase |
Protein accession | YP_749959 |
Protein GI | 114562446 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTG CGCTGGCCGC CAAAAACGCA TTAATTGACT TAAACCAGCG CTTAGTTGAG CAGTACACTG CAAAACACCC TATTGCTGAT ATTGTTAAAC ACCGCAGTCA ATTTGTTGAT GCTTTACTAA CACAAACTTG GCAAGATTTT GGCTTACATA ATAACCATCT TGCCTTAGTT GCCGTTGGTG GCTATGGTCG TGGTGAATTG CATCCTTATT CAGATATTGA CTTACTTTTT TTGGTCGACG ATGAACAACT ATCACCTGAG ACTGAAACTA AACTGGGTCA ATTCATTACT TACCTTTGGG ATACTGGGCT TGAAATAGGC CACAGTGTCC GCACAATTGC GCAAACCATT GAGCAAGGTA AAGCAGACAT CACCATTGCC ACAAATCTCA TTGAAGCCAG ATTGCTCACA GGTAATGAAT ATCTATTTGA CGTGTTATAC GATGCTATTC GCCAACAAGA CTTTTGGCCC TCTTATGACT TTTATAACGC CAAGAAAGAT GAACAAACTG CTCGCCATAG TAAAGCCAGT GCCTTTGATT TAGAACCTAA CATTAAAACC TGCCCCGGCG GATTGCGTGA TATTCAAACC ATCGCATGGG TCGCAATGCG CCACTTTGAT GCAGCTACGC TTGAAGAGCT TGTTGAACAC GACTTTTTAT CACCAGCAGA ATTGGCAGAA TTAATTGAAT GCCAAAATTT TCTGTGGGAA ATCCGTTTTG CACTTCACAT CACCGCTAAT CGCAACGAAA ACAGATTATT GTTTGATTTA CAGCGACAAA TAGCCAGTTT ATTAGGTTAC GAAGATGCAA CTCAATTAGC CGTCGAACAA ATGATGAAAC GCTACTATCG TACGGTTCGC CGGGTGATGG AGCTTAATCA AATGCTGCTG CAATTGTTTA AGCGTGCAAC ATTAGGTCAC ACTCAAGCAC TAGAAATCCA GCCGATAAGT GAGGCTTATC AACGTCGCGG GCGTTATATT GAAGTGTTAG ATGACGATTT ATTTAGCCGC CAAAACGAAG AAATATTACG TTTATTTCTA CTGGTGGCGA AAAACTCTAA CATTCAAGAA ATTTACGCGC CAACGTTACG ATTACTGCGC AATGCCCGTA GAGCTCTAAC ATCACCCTTA CAAGAAAATC CCGCCTGTCG TAAAGTGTTT ATGGAGATAT TAAAACATCC CCGAGGTATT ACCGCGCTTT CACTCATGCA TCAACACGGG ATTTTATCGT CTTACTTACC GGCTTGGCGC AAGATTGAAG GCCAAATGCA GTTTGATTTA TTTCATGCCT ATACGGTTGA CGAACACACC CATAGATTAC TGCTCAATAT TGACCGCTTT TCACAGGCTG AACAAAAAGA TGAATTTCCA CTAGGCGCCA TCTTAATTAA TCAGTTGCCG AAAAAAGGCC TATTAGTCCT CGGGGCCATC TTTCATGATA TCGCTAAAGG CCGTGGCGGC GATCACAGCA AATTAGGTTC AAAAGACGCC ATCGATTTTT GTAAATTACA TGGCATGAAT GATCATGACG GTCGCTTAGT GGCTTGGTTA GTTGAAAATC ACCTCGTGAT GTCAATCACC GCTCAGCGCA GAGATATTTC AGACCCTGAA GTGATTGCAC TATTTGCTGA AAAAGTACGC GATGCAGCGC ACTTAAGTTA TTTATATTGC CTCACAGTAG CCGATATTTG TGCCACTAAT GAGAAAACAT GGAATAACTG GAAAGGCTCG TTATTACGCG ACTTGTATTT TTCAACTCAA CGAGTATTAG CTCGGGGAAA AGAAAAACCT ATCGATGCTA AAGCACGCGT AAAAGAGATC CAAGCCAAAG CTAAAAAAGA ACTTATTCGT CGTGGCCTCA AAGAAAAAGA CATGGATGAA CTCTGGTCTC GATTCAAATC TGACTATTTT TTACGTCATC AGCCAACCCA AGTGGCTTGG CATGCAGAGG CTATTCTAAA ACATCATCAC GACGAACCAT TAGTGTTAAT GTCTAAACAT ACAACGCGGG GTGGGACGGA GCTTTTTGTC TATAGCAAAG ATAAACCAAA ACTGTTTGCC ACCGTCATGA CCGTTTTAGA CAACAAAAAT ATCAATGTTC ATGACGCTAA TATCATGACA TCAAAAGATA ACTATGCACT CGACACCTTT GTGATTTTAG AACAAGATGG CGAGCCAATT ATCCAATTGT CACGCATTCA AAGTATTCGT AAAGCACTTG AAAAAGCCTT GGCCAGTGAA AATCCAAAAC TGCCGAAGTT TAGAAAACTA GCCCGGATCA TGAAACCTTT TAATGTTGCG ACTCATGTGA GTTTCTTACC CAGTGCTCGC CATGGTACAA GTATGATGGA ATTAATCACC CTCGATACCC CAGGCCTATT AGCCAAAGTC GGTGATACGC TCTATCGTTG CAACGTGACA TTATTAGCAG CCAAAATTAC CACTATTGGC GAACGTGCAG AAGATTTTTT CATATTACAA AACCAAAGTG GAACGGCCCT AGATGAGCCA CAACAGCAAC AATTATCTGA TGCGCTAACA CTGGCGTTAA AATCATCTAA CTAA
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Protein sequence | MNTALAAKNA LIDLNQRLVE QYTAKHPIAD IVKHRSQFVD ALLTQTWQDF GLHNNHLALV AVGGYGRGEL HPYSDIDLLF LVDDEQLSPE TETKLGQFIT YLWDTGLEIG HSVRTIAQTI EQGKADITIA TNLIEARLLT GNEYLFDVLY DAIRQQDFWP SYDFYNAKKD EQTARHSKAS AFDLEPNIKT CPGGLRDIQT IAWVAMRHFD AATLEELVEH DFLSPAELAE LIECQNFLWE IRFALHITAN RNENRLLFDL QRQIASLLGY EDATQLAVEQ MMKRYYRTVR RVMELNQMLL QLFKRATLGH TQALEIQPIS EAYQRRGRYI EVLDDDLFSR QNEEILRLFL LVAKNSNIQE IYAPTLRLLR NARRALTSPL QENPACRKVF MEILKHPRGI TALSLMHQHG ILSSYLPAWR KIEGQMQFDL FHAYTVDEHT HRLLLNIDRF SQAEQKDEFP LGAILINQLP KKGLLVLGAI FHDIAKGRGG DHSKLGSKDA IDFCKLHGMN DHDGRLVAWL VENHLVMSIT AQRRDISDPE VIALFAEKVR DAAHLSYLYC LTVADICATN EKTWNNWKGS LLRDLYFSTQ RVLARGKEKP IDAKARVKEI QAKAKKELIR RGLKEKDMDE LWSRFKSDYF LRHQPTQVAW HAEAILKHHH DEPLVLMSKH TTRGGTELFV YSKDKPKLFA TVMTVLDNKN INVHDANIMT SKDNYALDTF VILEQDGEPI IQLSRIQSIR KALEKALASE NPKLPKFRKL ARIMKPFNVA THVSFLPSAR HGTSMMELIT LDTPGLLAKV GDTLYRCNVT LLAAKITTIG ERAEDFFILQ NQSGTALDEP QQQQLSDALT LALKSSN
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