| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1163 |
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| Symbol | flgD |
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| ID | 4277872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1369938 |
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| End bp | 1370723 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133938 |
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| Product | flagellar basal body rod modification protein |
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| Protein accession | YP_749854 |
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| Protein GI | 114562341 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.844763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTCG TTAATTCTTA CAGTCAGTCT TTACCGCAAC AATCCAGTAG TGCATCTAAT
ACTAGCGCTA CAACGAAAAG TTCTGTACAG ACAAATACGA CTAGCACGAC TACGGGTAAT
CCTTTCCTAG ACGGAATTCG TTTGCCTGAA GAAAGCGCTA TCCCTGAATC AAAAGATCAG
ATGTTAAAGC AAGAGGATTT TTTTGCTTTA CTTAGTCAGC AGTTGTCGAT GCAAGATCCT
TTTAAACCGG TTGATAACGA TCAAATGATT GCCCAAATGG CATCGTTTTC TACAGTAGAT
GGTATTTCAA ATCTTAATGA TGAAATTCTT AACCTTAATA CTGTGATGAG TTCTAGCCAG
GCGTTACAAG CTTCAGGCTT GGTTGGACGT AAAGTGCTCA TTCCTTCTGA TACCGGCGCT
ATCTCTACTG AAAGCTCTGA GATAAAAGGG GTGATCAGTA CACCGTCAGC GATTGAAACG
ATTACGGTAA GGATTGAAGA CGAGTCGGGT CAGCTTATTA AGAGCTTTAA TGTTGACGGC
AGTAAAGGCG GCAATGTTGA CGTGACTTGG GATGGTTTAG ATAAAAGTGG TAACCCAGCT
AAAGCGGGTA ATTATGCCAT TAAGGCCAGT GGTAAAGTCG ATGGAACGTC GGAAGATTTA
GCCGTGTCGA CTTACGCTCA TGTTACTAGT GTGTCATTAG GCACTGTAGC AACAGGAGCA
ATTTTGAATT TGCGTGGAGT AGGTGGAATT AAGTTATCTG ACGTACTCGC AGTATCTGAA
ACATAG
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| Protein sequence | MSLVNSYSQS LPQQSSSASN TSATTKSSVQ TNTTSTTTGN PFLDGIRLPE ESAIPESKDQ
MLKQEDFFAL LSQQLSMQDP FKPVDNDQMI AQMASFSTVD GISNLNDEIL NLNTVMSSSQ
ALQASGLVGR KVLIPSDTGA ISTESSEIKG VISTPSAIET ITVRIEDESG QLIKSFNVDG
SKGGNVDVTW DGLDKSGNPA KAGNYAIKAS GKVDGTSEDL AVSTYAHVTS VSLGTVATGA
ILNLRGVGGI KLSDVLAVSE T
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