| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1103 |
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| Symbol | |
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| ID | 4277166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1304050 |
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| End bp | 1305504 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133877 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_749794 |
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| Protein GI | 114562281 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC AAAAAGGGGC TGATTACTGG ACCAAGCGGA TTAGTGATCA AGAAATGCCT
GCATTATGTT CAACAGTGCG TGATTTAGAA AAGTTGGCAA AAGACGATGT GTCTTCGTTA
TCTTTGTTAG GTCGAAGTGT CATGCACGAC AATGCACTCA CCTCGCGTAT TTTGCGAGTG
GCAAACAGCG CCACTTACAA TAAAGGTATT AATCCAGTTT CGACCGTAAG CCGTGCAGCG
GTTGTATTAG GTTTTGATAC AATTCGCAAC ATATGTATTA CCGCAAAACT ACTCACCAGT
TTACTTGAAA ATAAGCACCT GAGCGAAAGT GTCTATCAAC GTTTATTAAA ACTGATGGCG
CAATCTTTTC AGGCGGCGAT GCTCGCTAGA ATGATGATGA GCGACCGTGG AGAATCGCTA
CGTGAAGAGG TATTTATTGC CTCGTTATTG TATCGGATAG GTGAAAGTGC TTTTTGGAGC
ATGGGCGGTG AATTAACCGA ACAGCTTGAT AAAAAGTTGT TAGCGACTGA CGATAAAATT
GAACAAAGCT CATTAATTCG AACTGAACTA GGTACCTCTT TTACCCAGCT GACCCAAAGC
ATTGCCAGAA GCTGGGGCTT AGGTGAAGTA CTGATTAAGT CTTTAGCACA GCCAGACGAG
CGCATGCCTG AGATCCGTTG TATTTTTTTA GCCGATAAGT TATCAGAAAT CGTGTCACAG
CCTAAAGTTA ACGCTGAAGA GCTGCACAAA CGCCTATCTC AAGCCGCAGA AATGTTAGAC
ATCAGTGTGG ATGAATTTAC TGAAAAGTTT ATCGATTGCA GCGAAATAAC CCATAAATTA
GCCATTGAAT ATGGTGCCAA AGCCATAGTG TCTTACTTAC CTAATACCGC AGACGTATTA
GAGCATGTCG ACGCTCCTAT TGAGCTCACT GAGATAAGGC AAACCAATCA AGGTTATCAG
TTAAGTAAAT TGAGACAATT AACCCATTAT GCCGTGGTTA AAACTGATTT TAATCAAATA
ATGCACACCA CATTGGAAGG AATGTTAACC GGCGTTGGTT TAGATAGGTG TGGTGTATTG
TTACTCTCTC CAAGTCGTAA ATTATTACAA CCAAGGGTGA TGATGGGTGA TGGCGCTGAA
TTATTAAAAC AAGCCTTTGT GATAGAACTA GACGACCCAC GATCCGTTTT TACTCAATGT
ATTGGGCAAA AAAAGAGTGT GTGGGTAAAT TCACCCACCA GTAAAGAATG CAAAGTTCAA
ATTGATGATG TACTCGTTGA ACGCTTTTCT CAAAATGGCT TTTTATTAGC GCCGCTCTTT
GTTGGACAGA AAGTGTTGGG ATTATTTTAT GCCGATAGGC AGGGTACTGG ACGTCGTTTT
GAGCAAGAGG ATTTCGACAG TTTCACTCAC TTTAGTGAGC TCGCTAATGT GTGTTTTGGA
GTGTCGATGA CATAG
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| Protein sequence | MTQQKGADYW TKRISDQEMP ALCSTVRDLE KLAKDDVSSL SLLGRSVMHD NALTSRILRV
ANSATYNKGI NPVSTVSRAA VVLGFDTIRN ICITAKLLTS LLENKHLSES VYQRLLKLMA
QSFQAAMLAR MMMSDRGESL REEVFIASLL YRIGESAFWS MGGELTEQLD KKLLATDDKI
EQSSLIRTEL GTSFTQLTQS IARSWGLGEV LIKSLAQPDE RMPEIRCIFL ADKLSEIVSQ
PKVNAEELHK RLSQAAEMLD ISVDEFTEKF IDCSEITHKL AIEYGAKAIV SYLPNTADVL
EHVDAPIELT EIRQTNQGYQ LSKLRQLTHY AVVKTDFNQI MHTTLEGMLT GVGLDRCGVL
LLSPSRKLLQ PRVMMGDGAE LLKQAFVIEL DDPRSVFTQC IGQKKSVWVN SPTSKECKVQ
IDDVLVERFS QNGFLLAPLF VGQKVLGLFY ADRQGTGRRF EQEDFDSFTH FSELANVCFG
VSMT
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