| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1094 |
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| Symbol | smpB |
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| ID | 4277628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1293504 |
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| End bp | 1293992 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133868 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_749785 |
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| Protein GI | 114562272 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.146996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAAAA AGAAATCAGC AAACGCCTCA GCGAGCATCG CACGCAATAA ACGCGCGACC
TTTGAATACC GCATAGAAGA CAAAATCGAA GCGGGATTAC AACTTATGGG CTGGGAAGTT
AAGTCCATTC GCATGGGTAA AGTAAATTTA TCTGATTGTT ATGTCTATAT TAAAGAGGGT
GAAGCCTTTA TGCATGGTTG TACTATTCAA CCACTTAATA CAGCTTCAAC CCATGTAATA
TGTGATCCAA TCAGAACCAA AAAACTGCTA TTAAAGCGCA GTGAAATTGA CAAACTTGCC
GGCCTAATTG AGCGTCAAGG CTACACCTTG GTGCCACTAT CAATGTACTG GCGCAAAGGC
GCTTGGGTAA AAGTTGAAAT TGGCTTAGGT AAAGGTAAAA AAGATCACGA CAAACGTGAA
GACACCAAAG AACGCGAGTG GAAAATTGAA AAAGCTCGTG TAATGAAAAA AGACAAAGAA
AACGCTTAA
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| Protein sequence | MVKKKSANAS ASIARNKRAT FEYRIEDKIE AGLQLMGWEV KSIRMGKVNL SDCYVYIKEG
EAFMHGCTIQ PLNTASTHVI CDPIRTKKLL LKRSEIDKLA GLIERQGYTL VPLSMYWRKG
AWVKVEIGLG KGKKDHDKRE DTKEREWKIE KARVMKKDKE NA
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