| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1085 |
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| Symbol | |
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| ID | 4277619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1283517 |
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| End bp | 1284590 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133859 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_749776 |
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| Protein GI | 114562263 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAACAT TCATTAAAAA TGAAAGTAAA AGTAACGGAG AACTTCAGCA GGCTCGCGTT
ATATCTCTGT TTTCATTAGT CGGAATGTCG GTGACTTTTG TGATGGGCGT AATAAGCTTA
TTTAACAGTA ATAATGTATT AACCATCACT CTATTTGTCT CCAGCATCAT TTACTGTTTG
GCTTACATTG TACTCAAAAA ATACAACAAG CTTAACCTGA GCTCTTTTAT TATCATTTAC
TCGTTATATA TACTGATGTT CTACTTAGTC TTTACTGGCG GGGTGGAACA AACAGGTCCA
TTGTGGATAT TTATTGTGGC GCCAGTTTCC GTTTATGTAC TGGGATTAAG TTATGGTCTG
GTTAACCTGC TATTTTTCTT GAGTATTATC GCTATTATTA TGTTTTCACC GATAGAGATG
CCTCAATATG CAACTTACTC AACTGAGTTT AAAGTCCGGT TAATATTGTC ATTTTTAACC
ACTACCTTCC TCTCCGCGTT ATATGAATAT TCAAGAATGT TATCCTACAA TAGTGCGCTG
AAGCTCGGTA AAAAATATCA ACAACTCGCA TTATCTGATC CATTAACGAC ACTGGCTAAC
CGACGTAATG CGTTAACCAT TTTACAGCAG GAAAAATCAA GAATTTCACG AAACAACGAA
CCATTATCTG TTTTGCTCTG CGATCTTGAT CATTTTAAAA TGGTCAATGA TAAATACGGC
CACAATTGCG GCGATATGGT GCTTACTGAG TTATCGCAGG TGTTTAAACA GAGTGTGAGG
CAGCAAGATT GTGTCGCACG CTGGGGAGGC GAAGAGTTTC TGTTTATTCT GCCGCAAACC
TCGGCTGAGC AAGCTTCTGT CATTGCAGAA AAAATTCGTA CTAACGTACA CCATCATAAG
GTGCATTTTC TTAAACACGA GATTAGCCTA ACCATCAGTA TTGGCATTTC ACAATTAACC
GATGATCAAA ATATTGATGA ACTTATCAAC AATGCCGACA GAAATTTGTA TCAAGCGAAA
AAGAATGGCA GAAACCAAGT GTATCCACAG CAAACAACAT CTATCGACCT TTGA
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| Protein sequence | MLTFIKNESK SNGELQQARV ISLFSLVGMS VTFVMGVISL FNSNNVLTIT LFVSSIIYCL
AYIVLKKYNK LNLSSFIIIY SLYILMFYLV FTGGVEQTGP LWIFIVAPVS VYVLGLSYGL
VNLLFFLSII AIIMFSPIEM PQYATYSTEF KVRLILSFLT TTFLSALYEY SRMLSYNSAL
KLGKKYQQLA LSDPLTTLAN RRNALTILQQ EKSRISRNNE PLSVLLCDLD HFKMVNDKYG
HNCGDMVLTE LSQVFKQSVR QQDCVARWGG EEFLFILPQT SAEQASVIAE KIRTNVHHHK
VHFLKHEISL TISIGISQLT DDQNIDELIN NADRNLYQAK KNGRNQVYPQ QTTSIDL
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