| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1077 |
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| Symbol | |
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| ID | 4277839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1273755 |
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| End bp | 1275593 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133851 |
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| Product | von Willebrand factor, type A |
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| Protein accession | YP_749768 |
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| Protein GI | 114562255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0195033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA CCCATAAACA ACTTACTAGC AGCGCCTTAG CCATCGTGAT TAGTGCTATT
ATTATCAGTG GTTGTGCGCA AGAATCCAAA GACAGTGCGA AACAAAGTCA GCCCCAATCT
ACTTCTAAAA TTCAATCCGC GAGTAAAACG GATTCCTCTG CACAAGCGCG TCCCGAGTTA
TCTGAGGTAG CAGGCTTAGT GATGGCGTCT GAGCCACAGG CTGATTTATA CCAAGGCTCA
AAGGAGCTAC ATCGCAGTGC TAAAGTCATG ACATCGTCAA TGGCGCAGCG TATTGTGAGT
TCTCAGCATG TTAGCGTAAG TGATCGCAAT TTCTCTTTGG CACCAACGAC TAATGATAAG
TTTGAGTCGG TAGTGCAAAA CGGCAATATG GTTGCTGGCG AAACACCGGT ATCGACATTT
TCAATTGATG TTGATACTGG CAGTTACAGC ACTACGCGCA GATTAATCAA TCAAGGCCAA
CTGCCGACTA AGAATACCGT TAGGGTAGAA GAGTTAGTCA ATTACTTCAG CTATGACTAC
CCAGTACCGA CAAACTCTGA GCAGCCATTT AGTGTCAATA CTGAATTAGC ACCATCACCT
TACAATGCAG ATACCCAGTT ATTACGTATT GGCCTTAAAG GGTTTGATGT TGCGCCTGAT
AAGCTTAGCG CAAGTAATTT GGTGTTATTG CTTGATGTGT CAGGCTCTAT GTCGTCTGCT
GATAAATTGC CATTATTGAA ACAAGCCATG CTAATGCTGA GTCAGCAACT ATCGGCGCAA
GATAAAGTAT CGATTGTGGT GTACGCCGGT GCCAGTGGTG TAGTCCTTGA TGGTGTCGCA
GGTAATGACT TTACCGCCAT TAAAACAGCC CTAAGTCAGT TAAATGCGCA AGGTGGCACT
AACGGTAGCC AAGGTATTCA GTTGGCGTAT CAATTAGCGC AAAAGCACTT TATCGAAAAC
GGCAGTAACC GAGTCATATT AGCCACCGAC GGTGACTTTA ACTTGGGGAT GACAGATCAT
CAGCAATTGG TCGATTTCGT TGCCAGTCGA AGCAAAAAGG GGATTGGCTT ATCAACACTT
GGTTTTGGAC TAGGTTCAGG TTCTGCCAGT TACAACGACC ATTTGTTGGA GCAATTATCC
AATAAAGCTA ACGGACAATA TGCCTTTATC GACACCTTAA ATGAAGCACG GAAAGTGCTG
GTTGATCAAC TTAGTGCCAC ACTGTTAACC ATTGCTCACG ATGTTAAAGT GCAAATTGAG
TTTAACCCTG CGGTGGTGTC TGAGTATCGA CTGATTGGTT ACGAAAACCG CTTGTTAAAT
CGTAGTGACT TTAATAACGA TGCCGTTGAT GCGGGCGAAA TTGGTGCGGG TCATACTGTT
ACTGCATTAT ATGAAATTCG TTATAACGAC AGCCATAATC GCCTAGTTGA TCCGCTGCGT
TATACCGCCA CAGAATCGAC GCAAATAGAT GATGCTAAAG TTCATCCACA TACCGCAAAT
GAAGTGGCTT ATTTAAAGCT GCGTTATAAA GCGATTGGCG AACAAGACAG TCAATTAATC
ACTTACCCCA TTAACCGTGA GCAGCAGTTA ACGCATTTAC ACCAAGCCAG TGACGATTTT
AGATTTGCTG CGGCAGTTGC AGGTTTTGGT CAGCTGCTTA ACCAGAATAA TTATGTCCAC
GATACTGATT ATGCTAAGTT AATTACACTT GCTGAGTCTG CAATGGGCCA AGACCGTTTT
GGCTATCGCC ATGAGTTTGT GCAAATGTTA AAAACTGCAA GTGTACTCGA TAAGCAGGTT
TTGATGACTG AACCTGAAAC TCGTTGGGTT AGCCAATAA
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| Protein sequence | MNNTHKQLTS SALAIVISAI IISGCAQESK DSAKQSQPQS TSKIQSASKT DSSAQARPEL
SEVAGLVMAS EPQADLYQGS KELHRSAKVM TSSMAQRIVS SQHVSVSDRN FSLAPTTNDK
FESVVQNGNM VAGETPVSTF SIDVDTGSYS TTRRLINQGQ LPTKNTVRVE ELVNYFSYDY
PVPTNSEQPF SVNTELAPSP YNADTQLLRI GLKGFDVAPD KLSASNLVLL LDVSGSMSSA
DKLPLLKQAM LMLSQQLSAQ DKVSIVVYAG ASGVVLDGVA GNDFTAIKTA LSQLNAQGGT
NGSQGIQLAY QLAQKHFIEN GSNRVILATD GDFNLGMTDH QQLVDFVASR SKKGIGLSTL
GFGLGSGSAS YNDHLLEQLS NKANGQYAFI DTLNEARKVL VDQLSATLLT IAHDVKVQIE
FNPAVVSEYR LIGYENRLLN RSDFNNDAVD AGEIGAGHTV TALYEIRYND SHNRLVDPLR
YTATESTQID DAKVHPHTAN EVAYLKLRYK AIGEQDSQLI TYPINREQQL THLHQASDDF
RFAAAVAGFG QLLNQNNYVH DTDYAKLITL AESAMGQDRF GYRHEFVQML KTASVLDKQV
LMTEPETRWV SQ
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