Gene Sfri_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0915 
Symbol 
ID4278619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1077885 
End bp1078223 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content41% 
IMG OID638133681 
ProductSecC motif-containing protein 
Protein accessionYP_749606 
Protein GI114562093 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA AATACTTTTT TAAAGGTCGT AGAACCCCTA AGCCAGCTTA TGGTGAAAGT 
GGTTATAACA CCAAACGTGC AGCCAAACTG GGCACGGAAG CTTTACCGTT AATATTGTCA
GTTCAAACCG AAGCTCGCCA ACATGAAGTG GCTGCAATGG TCGCTGAACA GCAACTCTTT
GCTAATATCA CTATTGATGC AGATAAGCCT GAAAACATTG TTGATTTAAC CGGTTTATTG
AATAAACCTA AAGCGGTTAC TTCTGAAGCT AAGCCTAACC GCAATGATGC TTGCCCTTGT
GGAAGTGGTA AAAAGTACAA AAAGTGTTGC GGTGCTTAA
 
Protein sequence
MSDKYFFKGR RTPKPAYGES GYNTKRAAKL GTEALPLILS VQTEARQHEV AAMVAEQQLF 
ANITIDADKP ENIVDLTGLL NKPKAVTSEA KPNRNDACPC GSGKKYKKCC GA