| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0910 |
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| Symbol | |
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| ID | 4278614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1068323 |
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| End bp | 1070971 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133676 |
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| Product | UTP-GlnB uridylyltransferase, GlnD |
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| Protein accession | YP_749601 |
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| Protein GI | 114562088 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0445386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCGC AACCTGCTAG TACAGATTTG CGCCCAGATA TGACCAGCGC TGAATTAAAA
CAGGCGATTA AGTCACTGGA TCAATATTTA CAAGATAACA TTTTTCAAAG TGCAATTAAT
GACACCTTGA ATAAGCGATC ACATTTTTTC GATGCGCTAT TATGCCAACT TTGGCAACCC
TTCGAATTAG ATCCCGCACG TATATCGCTC AATGCAGTTG GGGGTTACGG CCGGCAAACT
TTACATCCTT TCTCTGATAT CGACATCTGC GTTATTCACG ATGGTCCATT AACCCCTACG
GAAGCTGCTT CTGTAAGCCA ATTTCTGACT CAACTTTGGG ATCTTAATCT CGATTTAGGC
CACGCTGTAC GCAGTTTAAC TGACACATTC CAAGCTTGTA AGGATGATGT AACCATTGCA
ACCAGCTTAC TGGAGATCCG TCATTTATTC GGTAATAGTC AGCATCAACA GCAAGTGTTG
AATGCACTGT ACGGCCAAGA TTTATGGCAA AGCCAAGCAT TTTTTAATGC CAAACTCAGC
GAACAGCAAG AGCGTCACGC CAAAGCACAA GGCACCTCAT ACAGTATTGA ACCCAATCTT
AAAACTAGCC CTGGTGGAAT GCGCGATATT CAAACCCTTA CCTGGGTTGC TCGCAAACAT
TTCAGCGTTG CCAATATGCA ATCACTTCGG AGCTTTGGTT TTTTAACCAA CGACGAATAC
GCTGAGTTAA TGGAGTGCCA ACACTTTTTA TTTAGAGTGC GCTTTGCGTT GCATCAAGCA
GCCCAACGTT CTGAAAATCG TTTATTACTA CAATACCAAG CTGAAGTAGC TAAATTAATG
GGTTTTGGTG ATGGTATGGC CATCGGCGAA AGCGGCAATA TTGCCATTGA AAAAATGATG
CGCCAATTAT TTCGAGCAAT GAAGCGCATA GGCGAATTAA ACAAAATCTT AATGGCGTAT
TTTCAACGAG AAATTATTCC AGAGCTTAAT CCGCAAATAA TCGCGATTAA CGATAACTTT
GAAATTGTTG ATAAGTACAT TCACGTTCGA GACGAAACCG TATTTATCGA TCGCACTCAA
ATTATGGCGT TATTTGAGTT TATCGCGATT CATCACGACA AAATAATTGG TATTACTGCA
GAAACCTTAC GTTCTTTGCG CCAAGTAAGA CGTCGTTTAA TGGGTGACTT ACAAGATTTT
CAGCGTTGTA GAGAGCAATT TAAAGCGATA TTTGTTCATC CTCAAGGCAT GGGACTTGCC
ATTACCTTGA TGCATCAACA CGGTATTTTA GCGTCTTATT TACCACAATG GCGTGAAGTT
GTTGGTCAGA TGCAGTTTGA TTTATTCCAT GCCTATACGG TCGATGAGCA CACCCACAAG
GTGCTTAAAA ATATATACAT CTACGGAAAC GACATCAAAA CGTTGGATAA AGATCTGGCA
TTAGCCGCTG ATATTTATCA AAAAATGTCT AACAAATCGA CACTGTTATT TGCAGCATTG
TTCCATGACT TAGCTAAAGG CCGTGGTGGT GACCATAGTA AACTTGGTGC TGTTGATGCC
AATTTATTTG CTAAGTTTCA TGGCTTAAAA GTCTCACAAG AAAAACTGAT TTGCTGGTTA
GTAGAAAATC ATTTGTTGAT GTCTATTACC TCACAACGCA TGGATATTTA CGATCCTGAA
GTCGTGAATG CTTTTGCCAA AAAAGTAGGC ACCTTAACCC GTTTAGACGC CCTGTACTGC
CTGACCATTG CCGATATTCA GGCAACCAAT GATGATCTGT GGAATGACTG GAAAGCATCA
TTATTAAAAG ATTTGTATTT TGTTACTCGT AAAGCACTGC GCAATGGCTT TGAAAATATT
TTGCAACTGC GTACTTTGGT GCGGGAACAC AAACAAGAAG CGCTGAATTT ATTAGCCGCC
GATGACGATA GCAGTGACGA GATCAAAAAA TTATGGCGTC GCTTACCTAT CGCCTTTTTC
AGTAACGCCG AAGCGGATGA TATCGCCAGA TATACCCAAG CAATGATTAA CCACGATCTT
ACACCAGTAG CCGAAAATCA ATACAACACC TTGATTTTAC TCGACGATGT AGTGGTGAAA
GGTTGCAGTG ACGTGTTTGT TTACACCAAA GACAGACACG GATTGTTTGT TAAATTATTC
AATACGTTAG CGACATTACG TATTTCGGTA AAACAAGCAC AAATAGCCCG AACTAAAGAT
GGTTATGTGG TTGAGTCATT TAAAGTACTC GATTTTGATG AAAAGCCCAT TACCAGCGCT
CAGCGCCGTG AACAGGTCAT CGACAAATTA CATCAAGTGT TAGATAAAGG CGTTAATTTA
CCGAAAAAAC GCCAGTCTAG ACGGCATCAG AGTTTCGATA ATCAGCCCAA TATCGAATTT
CTACATTCAC GAAAATCGAC CCGTAGCTTA GTCAATGTTT CAGCATTAGA CACCAGTGAA
TTTATGGAAC AAATTGCCAG TGCATTTAGA GAATTGGATT TGAATATTCA TTCTGCCACC
ATCAGTACAG TCGGCGAACG CGCAGACAAT GTGTTTTTAT TATCCAATAA AGACGATCAA
CAATTAACCC CAGAACAACA GCAGCAATTG TCAGCAACAC TAATGCAAGC CATTACCACC
GACGAATAA
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| Protein sequence | MLSQPASTDL RPDMTSAELK QAIKSLDQYL QDNIFQSAIN DTLNKRSHFF DALLCQLWQP
FELDPARISL NAVGGYGRQT LHPFSDIDIC VIHDGPLTPT EAASVSQFLT QLWDLNLDLG
HAVRSLTDTF QACKDDVTIA TSLLEIRHLF GNSQHQQQVL NALYGQDLWQ SQAFFNAKLS
EQQERHAKAQ GTSYSIEPNL KTSPGGMRDI QTLTWVARKH FSVANMQSLR SFGFLTNDEY
AELMECQHFL FRVRFALHQA AQRSENRLLL QYQAEVAKLM GFGDGMAIGE SGNIAIEKMM
RQLFRAMKRI GELNKILMAY FQREIIPELN PQIIAINDNF EIVDKYIHVR DETVFIDRTQ
IMALFEFIAI HHDKIIGITA ETLRSLRQVR RRLMGDLQDF QRCREQFKAI FVHPQGMGLA
ITLMHQHGIL ASYLPQWREV VGQMQFDLFH AYTVDEHTHK VLKNIYIYGN DIKTLDKDLA
LAADIYQKMS NKSTLLFAAL FHDLAKGRGG DHSKLGAVDA NLFAKFHGLK VSQEKLICWL
VENHLLMSIT SQRMDIYDPE VVNAFAKKVG TLTRLDALYC LTIADIQATN DDLWNDWKAS
LLKDLYFVTR KALRNGFENI LQLRTLVREH KQEALNLLAA DDDSSDEIKK LWRRLPIAFF
SNAEADDIAR YTQAMINHDL TPVAENQYNT LILLDDVVVK GCSDVFVYTK DRHGLFVKLF
NTLATLRISV KQAQIARTKD GYVVESFKVL DFDEKPITSA QRREQVIDKL HQVLDKGVNL
PKKRQSRRHQ SFDNQPNIEF LHSRKSTRSL VNVSALDTSE FMEQIASAFR ELDLNIHSAT
ISTVGERADN VFLLSNKDDQ QLTPEQQQQL SATLMQAITT DE
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