| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0884 |
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| Symbol | |
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| ID | 4278641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1038754 |
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| End bp | 1039533 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133650 |
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| Product | prolyl 4-hydroxylase, alpha subunit |
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| Protein accession | YP_749575 |
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| Protein GI | 114562062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA CAACAGAAAA TGGCCAATAC TTTGTCGCAG CTTTTGAGCC AGGAGCAGAG
CATCCAGCGT TACCAACATG GGCAAGCTGT AACGACAATG GTGCAGAGCT AGCCTTATCC
GCTCCTAGTA CCGTGAGTAA AAAGCCGTTA ACGGATGTAC CTGGGGCATT TCAATTATTA
AATGTACTGA GCGCTGATGA ATGTCAGCGA CTCATTTCTG TCAGCGAAAC TATGGGGTTT
TTACCTGACG CTGCGGTGTC TTTACCGCGC AATGTGCGTC ATAACGACAG CTTAACCTGG
GTAGTCGATA ACACCACCGA ACGGCTTATT TGGGATCGTA TTGCAGGGGT AATGACCGAC
GATTTAGGCA TTTTTGAAGG TAAAGCCGCG CTGGGATTAA ATAATCGTTT CCGTTTTTAT
CGCTATAACG AAGGTGATTA TTTTAAGCCG CATTCAGATG GTTCGTGGCC GGGCAGCCAA
GTTATTGATG GCGAGCTTGT GCGTGATGCT TTTGGCGATC GATACAGCCA ACTCACATTT
TTGATATTAC TGACCGAAGA CTTTGAAGGC GGTGCGACAC GCTTTTTAGT CAATGCCGAC
AAGCCAAATT TACCAGCAAA ACACGGCGAT AATATGCGCC AAGTTGATGT GCGAACACCT
GCGGGAAGCG TGTTGTGTTT TCCTCATGGC ATGCACCCGC TGCACTGTAT ACACAGCTCT
GAGCCGATTT TCTCTGGGGT TAAATACATT ATCCGCACCG ATGTGTTGTT TGAGTTATAG
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| Protein sequence | MNNTTENGQY FVAAFEPGAE HPALPTWASC NDNGAELALS APSTVSKKPL TDVPGAFQLL
NVLSADECQR LISVSETMGF LPDAAVSLPR NVRHNDSLTW VVDNTTERLI WDRIAGVMTD
DLGIFEGKAA LGLNNRFRFY RYNEGDYFKP HSDGSWPGSQ VIDGELVRDA FGDRYSQLTF
LILLTEDFEG GATRFLVNAD KPNLPAKHGD NMRQVDVRTP AGSVLCFPHG MHPLHCIHSS
EPIFSGVKYI IRTDVLFEL
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