Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0841 |
Symbol | |
ID | 4276938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 988018 |
End bp | 988797 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133607 |
Product | hypothetical protein |
Protein accession | YP_749532 |
Protein GI | 114562019 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000335304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAGT TGTTTCGTAC CTTCTTTATA TTCTTAATTT TACTGTCTAC ACGTGGTGCT ATTGCCCAGC CTAACGAGCT TAAATACACC AAGCTAGCTC AGCCATCTGA CTTCAGCCAA AAATCATCTA ATGATATTGA GCAGCTAATG GCGCTTTATG ATCACAACAC CGACTTGGTG ACACAAGATA GTGATAACTT GCATGCTCTG ATGTCACGGG CACCGGCGGC GCAGCAAGAA CTGATTGACC TACTTCACTT CATTGACCAA TCAAGTAATA CCAAAACCAT TCTTCCTGCT ACCAAAAGTT ATCAGCGTGC GGCTCAAAAA GTGCAAACTA AATTTAATGG AGATGCCAGC CAACTAACCG ATATAGCACG GGCAAGTGTG GTGGCCTATG ACGTAAAAAG CTTGCTATCA AGTTACCAAC AGTTGAGCCA ATACACCGAA ATTGTGCAAT TGAAAAATCG TTTTGCTCAC CCTAAAGTAT CAGGTTATCG TGATTTAAAT GTATTAGTGA AATTACCCGT AAGCCAAATG GTGGTTGAAG TACAATTTCA TTTAAATGAT ATTGCCGACA TTAAAAGTGG CCCTGAACAT CATGTTTATG AGCAAATCCA GCAGATTGAG TCTCAGGCTA AAGCCACATC AAGACGCTTA AATGACATAG AGCAAGCCAC TATCGCTAAA CTGCGTCAAG ACTCTCACAA GCAGTATCAC AAAGCGTGGT TAAGCTACAA ACGTCAAAGT TTATACAGTT CACAACGCCA AGTTGCATAG
|
Protein sequence | MNKLFRTFFI FLILLSTRGA IAQPNELKYT KLAQPSDFSQ KSSNDIEQLM ALYDHNTDLV TQDSDNLHAL MSRAPAAQQE LIDLLHFIDQ SSNTKTILPA TKSYQRAAQK VQTKFNGDAS QLTDIARASV VAYDVKSLLS SYQQLSQYTE IVQLKNRFAH PKVSGYRDLN VLVKLPVSQM VVEVQFHLND IADIKSGPEH HVYEQIQQIE SQAKATSRRL NDIEQATIAK LRQDSHKQYH KAWLSYKRQS LYSSQRQVA
|
| |