Gene Sfri_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0841 
Symbol 
ID4276938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp988018 
End bp988797 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content41% 
IMG OID638133607 
Producthypothetical protein 
Protein accessionYP_749532 
Protein GI114562019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000335304 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT TGTTTCGTAC CTTCTTTATA TTCTTAATTT TACTGTCTAC ACGTGGTGCT 
ATTGCCCAGC CTAACGAGCT TAAATACACC AAGCTAGCTC AGCCATCTGA CTTCAGCCAA
AAATCATCTA ATGATATTGA GCAGCTAATG GCGCTTTATG ATCACAACAC CGACTTGGTG
ACACAAGATA GTGATAACTT GCATGCTCTG ATGTCACGGG CACCGGCGGC GCAGCAAGAA
CTGATTGACC TACTTCACTT CATTGACCAA TCAAGTAATA CCAAAACCAT TCTTCCTGCT
ACCAAAAGTT ATCAGCGTGC GGCTCAAAAA GTGCAAACTA AATTTAATGG AGATGCCAGC
CAACTAACCG ATATAGCACG GGCAAGTGTG GTGGCCTATG ACGTAAAAAG CTTGCTATCA
AGTTACCAAC AGTTGAGCCA ATACACCGAA ATTGTGCAAT TGAAAAATCG TTTTGCTCAC
CCTAAAGTAT CAGGTTATCG TGATTTAAAT GTATTAGTGA AATTACCCGT AAGCCAAATG
GTGGTTGAAG TACAATTTCA TTTAAATGAT ATTGCCGACA TTAAAAGTGG CCCTGAACAT
CATGTTTATG AGCAAATCCA GCAGATTGAG TCTCAGGCTA AAGCCACATC AAGACGCTTA
AATGACATAG AGCAAGCCAC TATCGCTAAA CTGCGTCAAG ACTCTCACAA GCAGTATCAC
AAAGCGTGGT TAAGCTACAA ACGTCAAAGT TTATACAGTT CACAACGCCA AGTTGCATAG
 
Protein sequence
MNKLFRTFFI FLILLSTRGA IAQPNELKYT KLAQPSDFSQ KSSNDIEQLM ALYDHNTDLV 
TQDSDNLHAL MSRAPAAQQE LIDLLHFIDQ SSNTKTILPA TKSYQRAAQK VQTKFNGDAS
QLTDIARASV VAYDVKSLLS SYQQLSQYTE IVQLKNRFAH PKVSGYRDLN VLVKLPVSQM
VVEVQFHLND IADIKSGPEH HVYEQIQQIE SQAKATSRRL NDIEQATIAK LRQDSHKQYH
KAWLSYKRQS LYSSQRQVA