| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0836 |
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| Symbol | |
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| ID | 4276933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 982784 |
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| End bp | 983323 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133602 |
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| Product | membrane-flanked domain-containing protein |
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| Protein accession | YP_749527 |
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| Protein GI | 114562014 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.420646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA AAACCCTAGT TAGTGCCCAC TTTCATGCAA ACCTAGGTCT GTACTGGTTA
TTGTCTGGCA GCGTATTTCT TTTCCTAAGT GTCGTTGGTA TTCCATTGTT ATTATTATGG
TTTCCCCTAG GGTTACTGGC GACAAAGCGT TACATCAATA ACATGAGTGC TGAATTAACC
GAGCAAAAAC TCATCGTCCG CAAAGGGTTG TTTACTCGAA CAGAAAATAC CGTTCCATTG
GATAAAATCA CCGATATGGC ACTTATCCAA GGTCCCATTA TGCGCATGTT TGGCATTCAT
AAACTTACCG TAGAAACCGC CGGGCAATCT GGCGCAGGGG CGTTAATTAG CTTAATTGGC
GTCATAAATG TAGTCGATTT TAGAGCACAA GTACTGGCAC AAAAAACACA ACTCAGTGAA
CGGCAAAACA GCGCATCAGC TCGTCCAAAT ACCGATGTAT TAATCCTAGA CAATCTACAA
CAAATGAACG CCACATTATT GCGAATAGAA CAATCATTAA CCGCTAAACA ATCAAACTAG
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| Protein sequence | MSDKTLVSAH FHANLGLYWL LSGSVFLFLS VVGIPLLLLW FPLGLLATKR YINNMSAELT
EQKLIVRKGL FTRTENTVPL DKITDMALIQ GPIMRMFGIH KLTVETAGQS GAGALISLIG
VINVVDFRAQ VLAQKTQLSE RQNSASARPN TDVLILDNLQ QMNATLLRIE QSLTAKQSN
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