| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0819 |
|---|
| Symbol | |
|---|
| ID | 4278772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 964284 |
|---|
| End bp | 964943 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638133587 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_749512 |
|---|
| Protein GI | 114561999 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCA ATAAAACCTT ACACAATAAT TACGGTACTG GACTGGCAAA CACCACTGAC
AGCAACGAAC TCAATGTGCC CAAAGGTGAC AACCCGCTCA TATGGCCTGT GCTGAGTTTA
TTACAATCGT CAAATCAAAG TTGGAAAGTG CATCATTTAG CCAGTGAATT ACAAACTAAA
GGTTTAATGC ATAACCTTGA CCCATTACCC GAAAAAGACC TATTCAAACG CAACTTTCTA
CTAATGAACG CCTTGTATGA ATTACAAGAC ATACTCATGC CTAAACAGTG GTTGCAAGTG
AAGGCGATGG AAATCCAAAT ATTTCGGATC ATTCCAGCCA GTGCTGATAT ACAACATATT
CGCGATGGTG CATTACGTGA CTATTATCTC GATTGGAACA ATTATGACTC CAGCGTTAAC
GTTGTACGGG AAATGCTTGA GTCATTTTGG TCTAGCTTTC AAGAGTATAT TGGTGTTAAC
ACACAGTTGA TGCACAAAGG TCATGCGTTA AAAGTGTTTG AACTTGATGA AACTGCAACC
GATAGAGACA TTCGTAAACA GTGGCGTAAG TTAGCGCTAA AATGGCATCC CGATCGTGAA
CAAGGTAATG CTGAACGCTT TCGAGAAGTG TGCGAAGCAT GGCAGACACT CAGAGATTAG
|
|---|
| Protein sequence | MLLNKTLHNN YGTGLANTTD SNELNVPKGD NPLIWPVLSL LQSSNQSWKV HHLASELQTK
GLMHNLDPLP EKDLFKRNFL LMNALYELQD ILMPKQWLQV KAMEIQIFRI IPASADIQHI
RDGALRDYYL DWNNYDSSVN VVREMLESFW SSFQEYIGVN TQLMHKGHAL KVFELDETAT
DRDIRKQWRK LALKWHPDRE QGNAERFREV CEAWQTLRD
|
|---|
| |