| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0811 |
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| Symbol | |
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| ID | 4277907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 954993 |
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| End bp | 956156 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133579 |
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| Product | putative lipoprotein |
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| Protein accession | YP_749504 |
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| Protein GI | 114561991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3489] Predicted periplasmic lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.208807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTA ACTACACTGC AATCTCACTA GCACTAGTGG CAACATTATC CGCGTGTGGC
GGTTCAGGCT CGGATGACAC TAGCACCCCG ACAACCCCAA CTACACCTAC AACCGGTTTT
AGTTTTGTCG CGACAGAAAT GATCACTAAC TTAACCGATG ATGTGATTGT GGCTGGTTAT
GCTGATTTAG CGGCAAAAGG TGATGCCTTA TTATTGGCAA CCCAAACCTT ACTTACTTCA
ACGGTACAAG CCGATTTAGT GGCGGCACAA AATGCGTGGA AGTCGGCTCG TCAACCTTGG
GAACAAGGGG AGTCGCATAT CTTTGGCCCA GTAGACTCAT TGAGTATCGA CCCGCATTTA
GACAGCTGGC CGTTAAACAC CACTGACTTA CAAACCCAGT TAGCCAACAG TAATGGTTTT
GATGCCGACA CCATTAAAGG TTGGAATGAT GACGTTCAAG GTTTTCATAC AATGGAATAT
CTGTTGTTTG GCGATGGTGT TAACAGCAAC ACAAAGTTGA TTGCAGATCT TAGCACCAAA
GAACGTGAGT ATTTAATCGC CTTAGCGGAA GTGTTCCGCG ATTACACCAC TCAATTAGAC
GATGCTTGGC AAGTGAGCCA TAACCCACAA GATGCTAACG CCAAACCTTA TGCCGAGTTG
CTTAAAACTC CTGGCGATGC AACTAACACT ATTTACTCTT CTCAGTTGGC GGTTATTGAA
GAATTGATCA ACGGCATGAT TGGTATTGTC GATGAAGTGG GTAACGGTAA AATTGCCGAT
CCATTCGGAG AGTCATTAAC TACGGCAGAC ACCTCTAAGG TGGAGTCGCA GTATTCGTGG
AACTCACTAA CCGACTTTTC AAATAACATC ATAGGTGTGC GTAACGTTTA TCAAGGTGAG
TTTACTGGTG GCGCTGATAA GCAAGGCTTA ATTGATTTTG TGACAGCAGC TGATGCGACT
TTAGCGACGC GTGTTGCCAG CGAAATTGAT GATGCCATTT TAAAAATCCA AGCCATTTCG
GGTAGTACTA GCATGCCGTT CCGCCAAGCG ATTCTCGATG CTGATGGCCG TGCTAGAACC
CAAGTCGCCG TGGATGCATT AACAAAGTTA CAAACGACGC TGCAGTCAGA TGTGCTGCCT
TTATTATCTG ATTGGAACTC ATAA
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| Protein sequence | MRFNYTAISL ALVATLSACG GSGSDDTSTP TTPTTPTTGF SFVATEMITN LTDDVIVAGY
ADLAAKGDAL LLATQTLLTS TVQADLVAAQ NAWKSARQPW EQGESHIFGP VDSLSIDPHL
DSWPLNTTDL QTQLANSNGF DADTIKGWND DVQGFHTMEY LLFGDGVNSN TKLIADLSTK
EREYLIALAE VFRDYTTQLD DAWQVSHNPQ DANAKPYAEL LKTPGDATNT IYSSQLAVIE
ELINGMIGIV DEVGNGKIAD PFGESLTTAD TSKVESQYSW NSLTDFSNNI IGVRNVYQGE
FTGGADKQGL IDFVTAADAT LATRVASEID DAILKIQAIS GSTSMPFRQA ILDADGRART
QVAVDALTKL QTTLQSDVLP LLSDWNS
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