| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0794 |
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| Symbol | |
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| ID | 4278711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 934684 |
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| End bp | 935589 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133562 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749487 |
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| Protein GI | 114561974 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCATA GTAAGATTGA TTTAAACTTA TTCCTCATTA TGAGCACGGT ATATCAGCAA
GGCAGTATTA CTGCTGCGGC CAGTAAGCTA CACTTAACAC AACCGGCTGT GAGCCACGCT
ATTGCTCGGT TGCGCGACAA ATTTAACGAT CCTTTATTTG TCCGTCATGG TCGTAAAATG
GTGCCAACCG CCTTATGCCA AAAAATGATT CCCGACGTGC AACAAGCGCT GCTGTTACTC
AATAATACTG TTAGCCAGCC CGCTACATTT GACATACAAC AGCACAAACG CGAGATAAAA
CTGGGCTTAA GAGACATATT AGAGTCAATG TTCTTTCCTA TTCTTATGCC CGATTTACTC
AATAACACCC CCAACATCAC CTTAAACAGT CGTCAAATTA AACGCACTGA ACTTGAGCCG
TCACTGGCGC AGCAAAGTTT AGATATCGTT ATCGATGTAC TGATGCCAAC CCATAAAGAT
ATTTGCAACA CTCTAATATG CAGCGAACGA TTTTCATTAG TGTGTCGCCA AAACCATCCG
ATTTTACAGC AGCTCACCCT CGCTAATTAT GCCGCCGCAT CTCATGCATT AGTGAGCTTA
AAAGACTTCA GCATCGACAC CGTCGACATG GCGCTTGCCC ATCAAGGCGT TAGCCGCAAT
ATTGCATTAC GTTGCGAGCA TTACTTTGCC GCCATCAGCG TCATCTGCCA ATCAGATTTG
ATCATGACCA TGCCAAACAC CTACGCCATG TTGTTACAAC AAACCATGCC AATTGTAGTA
TCACCACTCC CCTTTGAAGT GCCAGAACTG GCGGTACACA TGTATTGGCA TCAACAAGCC
CAAGACGATC CGGTAAATCA ATGGATCAGA AACAAACTGC TTAATATCTC AGCACAGTTG
TTTTAG
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| Protein sequence | MLHSKIDLNL FLIMSTVYQQ GSITAAASKL HLTQPAVSHA IARLRDKFND PLFVRHGRKM
VPTALCQKMI PDVQQALLLL NNTVSQPATF DIQQHKREIK LGLRDILESM FFPILMPDLL
NNTPNITLNS RQIKRTELEP SLAQQSLDIV IDVLMPTHKD ICNTLICSER FSLVCRQNHP
ILQQLTLANY AAASHALVSL KDFSIDTVDM ALAHQGVSRN IALRCEHYFA AISVICQSDL
IMTMPNTYAM LLQQTMPIVV SPLPFEVPEL AVHMYWHQQA QDDPVNQWIR NKLLNISAQL
F
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