| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0779 |
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| Symbol | |
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| ID | 4278697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 913721 |
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| End bp | 915235 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133548 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_749473 |
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| Protein GI | 114561960 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGACA CAATCAAACA AGCTATTAAT ATTGTCTGGT TTAAACGCGA CTTGCGCTTG
TCTGATCATC AGCCGCTCGT CGATGCGTTT AATCACGATT TACCCTGCTT GCTCATTTAT
ACCTTTGAGC CATTTATGCT GGCTGACTCG CATTATAATG AACGCCATTG GCGCTTTGTG
TGGCAGTCGC TGCAAGATAT GAATCAACAA CTGCTCCGAT TTAACGGACA GGTGTATATG
TTCAGTATGC CGATGATTGA CTTACTGGAT GAGATATCCC AAACATTTGA AATTAAGAAT
ATTTATAGTC ATCAAGAGAT AGGTTTACAC AACAGCTTTG AACGCGATAA AACGGTTGCT
CGCTGGTGTA ATCAACAGCC AGTTAGTTGG CAGCAGTCGC CTACTGGAGC TGTAGTTCGT
GGCCGAAAAA ATCGTCAGGC ATGGGATCAA CACTGGCAAC AAGTAATGAA CAGCCCTATT
GCCATCCCCA ACTGGCAACA ATGTCAGTTA CAAAAACTCG ATAACTATCA AGAGCCGACT
CTTGATAATG CCATCATGGC ACACAATGAT CAGTTTCAAA TAGGTGGCCC CAAAGCAGCC
AGAACAATAC TGAGCAGTTT TTTAACCCAT CGGGGTAAAG ACTATCAACG CAGTATTTCA
AGCCCGAGCT TAAGTCGGAC CCATTGTTCA CGCTTATCGC CTTATTTAGC ATGGGGAAAC
ATCAGTCTAA AGCAAGTATA TCAAGCGACA TTAACACGTT ATAACGAGGT GCAAACCAGC
AACAAAGCGT GGAGAAAACC GTTATTGGCG ATGATGTCTC GTTTACATTG GCATTGCCAT
TTTATGCAAA AATTTGAAAG CCAATGCAGC ATGGAATTTA CCCCGGTTAA CCCTGGGTAT
GTTGATTACC CCTACCGTAC CGACGACAAA GTGCAGCAAG ATATTCAACG CTGGGCTGAC
GGCCAAACGG GGATCCCTAT TATCGATGCC TGTATGCGTT GTTTAAAAGA AACCGGCTAT
ATCAACTTTA GAATGCGCGC CATGCTAGTC AGCTTTGTGA CTCACCATCT CAATATAGCC
TGGCAGCATG CCAGCTTACC GCTAGCCAAT TATTTTCTCG ATTTCGAACC CGGCATCCAT
TATCCGCAAC TGCAAATGCA AGCCTCGGTC ACAGGTATTA ACACCATAAG GTTATATAAC
CCCGTAAAGC AGTCACAAGA CCAAGACCCA CGCGGTGAGT TTATTCGATT GTGGTGCCCA
GAGCTCACCA ATTTACCCAA TGAGTATATT CATCAACCTT GGCAACAACC GCCTATGGAA
GCGATTTTTA ACGACATTAT CTTAGGTCGT GACTATCCAG AGCCAATGAT TGATTTAACT
CAAGCATCAC AAACTGCCCG CGATCGTTTA TGGTCGTATC GCGAACAACC TCAAGTTAAA
CAGCATATTG TTGCGGTATT AACCCGTCAT GTACGCCCAA AGCCCAAACA GAAGAAGGCT
CGCCATGACA CATAA
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| Protein sequence | MPDTIKQAIN IVWFKRDLRL SDHQPLVDAF NHDLPCLLIY TFEPFMLADS HYNERHWRFV
WQSLQDMNQQ LLRFNGQVYM FSMPMIDLLD EISQTFEIKN IYSHQEIGLH NSFERDKTVA
RWCNQQPVSW QQSPTGAVVR GRKNRQAWDQ HWQQVMNSPI AIPNWQQCQL QKLDNYQEPT
LDNAIMAHND QFQIGGPKAA RTILSSFLTH RGKDYQRSIS SPSLSRTHCS RLSPYLAWGN
ISLKQVYQAT LTRYNEVQTS NKAWRKPLLA MMSRLHWHCH FMQKFESQCS MEFTPVNPGY
VDYPYRTDDK VQQDIQRWAD GQTGIPIIDA CMRCLKETGY INFRMRAMLV SFVTHHLNIA
WQHASLPLAN YFLDFEPGIH YPQLQMQASV TGINTIRLYN PVKQSQDQDP RGEFIRLWCP
ELTNLPNEYI HQPWQQPPME AIFNDIILGR DYPEPMIDLT QASQTARDRL WSYREQPQVK
QHIVAVLTRH VRPKPKQKKA RHDT
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