| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0769 |
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| Symbol | |
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| ID | 4277936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 899627 |
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| End bp | 901690 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133538 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_749463 |
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| Protein GI | 114561950 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGTTAT CACCTGCATT ATTGTACTTA TTTATGTTGA TTTCGCCTTG GGTTGTAGCT
GAAGAATCTC TTAGCGACCT TGATTTGGAT TTAGATTCAC TGATGGCGAT GGATGTACAA
GTAACTTCGG CGATGAAAAG AACCCAATCA GCCTTTGAAA CCGCCTCATC TATATACGTA
TTAACCAAAG AACAAATTAC TCGTTCAGGC GTAACTTCTG TGCCAGAAGC GCTGAAAATG
GTCCCCGGAT TAGCCGTTAG GCAACTTGAT AATAATCAAT GGGCGATTTC ATCACGTGGT
GTTGCTTCGC GATTTTCAAG CAAATTATTG GTCATGATCG ACGGTCAAAG TTTATATACA
CCTGAGTTTG CCGCCGTTTA TTGGGAAACC CTGAACGTGC CGTTATACGA TATTGAACGT
ATCGAAATTA TCCGCGGCCA AGGTGGGTTA CTGTGGGGCA GCAATGCCAC TAATGGCGTT
ATTAATATCA TTACTAAAAA CAGCATTGAT ACTCGGGGCC TATATGCTGA TGTCAGCAGT
GGTAGCCAGC TTAATGTTGA TACCAACCTT CGTTATGGTG GCGATATCGG TAATAACGGC
AGCTTTAGAG TCTATGGTCA TGTGAAAGAT GGCCAGACAT CGGACAAAGG CATTAAGATG
GCGCCGGCTG ACTTTACTGA GCAACAATCA GCTGGAGTAC GGTTTGATTT CACACCTAAC
GATCAATGGT CTGGTCTTAT TCAAGGTGAT ATCACTCAGT CAACATTAGG CCAAAATTTT
AATGGTGTCG TTGACAGCAG TAACCGCAAT ATCTCATTTA CCGGTAGCTT AGATCGTACC
GATGCTCGCA TCATGGCAAG ATTGGAAAAT CGCATTTCAC CTTCCGCCAA CCAAATGCTA
CAAACATCTT GGTTAAAGCA AAGTGGTGAG CAAACTTATA TTCAAGAAGA GTTCGAATCA
TTTGATCTTG ATTACCAAAT TAATTTTTTG TACCAAGACT TGCAGTTTGA TTGGGGGCTA
AATTATCGTT ACAACGCTAT TTCATTTGCA CAAAGTACTT TTATACAAAG TGGCGGTGGT
TTTGATAATC TTCAGCAGTA TGGAACATTA GCACAAGCTC AATATAACGT GATTGCAGAT
AAATTAGACT TTATTGTGGG TGTCAAAGTT GACCATAACG ATTTGACTGG CTGGGAAAGC
CAACCGTTAG CAAGGTTAGT ATGGAAACCA CAGAATAACC AAGTCGTATG GTTATCTGTA
TCAAAAAGTG TTCTCGTGCC GTCGTTACTG ATGTTTAACG ACAACTACAT TATTGATGGT
CAAAGAGTCG AAGAAGTATC ACCTATCACT ACAGGCATAC CCGAAATTGA TCGTTATTAC
ATCCGAACTT ATCTAAATGG TAATAACAAG GTGAAGTCAG AAAAGTCGGT ATCTTATGAA
ATGGGCTATC GTTTATCTGA TACTACATGG GCGCTAGATT TATCAGTTTA TCATACCGAC
ACGGATAATG TTGCCGTGAT CGAAATCGAT CCTAATATCG ATCAATTTAT CCCCGTTTTT
ACAATGTTAC AAGCTGGACA AATTGATGCT GCAGTACAAG CATTAACGAC AACATCAATT
AACTTTAACT TAGTATCTAA TGCCGGGCTT ACCACTGAAG GTGGTGATGT GGTTTTATCA
TGGCAACCGG TAGACAACTT TACTGCCGAA GTAGGTTATA GCTATAACAC CTTTAATTAC
GATTTAGTGG ACAATACTTT TCCCGCAATT GGCTATGACT CAACCAGTCG CCAACTCTTT
ACTAAAGCTG ATATACATTT TTTTGAACAA CATAATATTT TTGCTTCACT CAGAGTTGAA
AATAGTGATG CCTATCGAAC AGATAATTAT ACCGCTCTCG ATATAACCTG GAATTGGGCT
TTTCAGCCTA ATTGGGCCTT CGCCATTATG GGCAAAAACC TGTTCGCAGG CACGCATCTT
GAGTATGGCA ATCATGGTGA AACGTACACG CAATCAACCT TTATAGATGA AAGTGTCACT
TTTAAAATTA CGGCGAAATT CTAA
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| Protein sequence | MKLSPALLYL FMLISPWVVA EESLSDLDLD LDSLMAMDVQ VTSAMKRTQS AFETASSIYV
LTKEQITRSG VTSVPEALKM VPGLAVRQLD NNQWAISSRG VASRFSSKLL VMIDGQSLYT
PEFAAVYWET LNVPLYDIER IEIIRGQGGL LWGSNATNGV INIITKNSID TRGLYADVSS
GSQLNVDTNL RYGGDIGNNG SFRVYGHVKD GQTSDKGIKM APADFTEQQS AGVRFDFTPN
DQWSGLIQGD ITQSTLGQNF NGVVDSSNRN ISFTGSLDRT DARIMARLEN RISPSANQML
QTSWLKQSGE QTYIQEEFES FDLDYQINFL YQDLQFDWGL NYRYNAISFA QSTFIQSGGG
FDNLQQYGTL AQAQYNVIAD KLDFIVGVKV DHNDLTGWES QPLARLVWKP QNNQVVWLSV
SKSVLVPSLL MFNDNYIIDG QRVEEVSPIT TGIPEIDRYY IRTYLNGNNK VKSEKSVSYE
MGYRLSDTTW ALDLSVYHTD TDNVAVIEID PNIDQFIPVF TMLQAGQIDA AVQALTTTSI
NFNLVSNAGL TTEGGDVVLS WQPVDNFTAE VGYSYNTFNY DLVDNTFPAI GYDSTSRQLF
TKADIHFFEQ HNIFASLRVE NSDAYRTDNY TALDITWNWA FQPNWAFAIM GKNLFAGTHL
EYGNHGETYT QSTFIDESVT FKITAKF
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