Gene Sfri_0760 details

Gene Information

• Locus tag: Sfri_0760
• ID: 4277927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 888658
• End bp: 889206
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638133529
• Product: NUDIX hydrolase
• Protein accession: YP_749454
• Protein GI: 114561941
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1051] ADP-ribose pyrophosphatase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCCTT CTATAATGCG CCACTTAACC ACTCGTTATC ATTCCGACAC CCCAGCAGAT 
TTTGTTGCCG CGAATCACCA AACGATGCTA ACGCGGCTTG CTGCTCGTGC CATTGTGATG 
CGTAATAATC AAATATTAAT GCTTTACACC CAGCGTTATC ATGACTATTC ATTGCCTGGT 
GGTGGCGTTG ATGTAGGTGA GGAGATAGAG CAAGGGCTGA TCCGTGAGTT ACAAGAAGAA 
ACTGGCGCTC AACAAATTCG CAATATTAAT CCATTCGGCT TATATGAAGA ATATCGCCCT 
TGGCAACGAG ATGGTTATAC ATCGGTTAAT ATGCTGTCTT ATTGTTTCAC TTGTGATATT 
GACAGCCAGC TGGGGGGAAC CCAGTTTGAA GCTCACGAAA TTAATAACGG CATGATACCA 
GTATGGATTG ATATCGATGA GGCTATTGGG CATAACCTTG ACACTATCGC CAACAGCAGC 
AAAAAAGGCT TATCGATTGA ACGAGAAACC TTTCTGCTGA AATTGATTAA ACAAGAGTTA 
CTGAGCTAG 

 

Protein sequence

MSPSIMRHLT TRYHSDTPAD FVAANHQTML TRLAARAIVM RNNQILMLYT QRYHDYSLPG 
GGVDVGEEIE QGLIRELQEE TGAQQIRNIN PFGLYEEYRP WQRDGYTSVN MLSYCFTCDI 
DSQLGGTQFE AHEINNGMIP VWIDIDEAIG HNLDTIANSS KKGLSIERET FLLKLIKQEL 
LS