| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0742 |
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| Symbol | |
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| ID | 4278279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 870214 |
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| End bp | 871416 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133513 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_749438 |
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| Protein GI | 114561925 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATA TTAGTGATGC TATTGGCGTC ATTGCACAAA GTGCAGACAC CTTGTTCATC
TTACTTGGTG CAATTATGGT GTTAGCCATG CACGCAGGCT TTGCATTTTT AGAAATGGGC
ACCGTGAGGC ATAAAAACCA AGTTAACGCC TTGGTTAAAA TTCTAACTGA CTTTGCCTTT
TCCGCTATCG CCTACTTTGT CATTGGTTAT CAAATAGCTT ATGGCAATCA CTTTTTTGTC
AGCGCAGAAA GCTTAACCAC TGATAATGGC TACCAACTGG TTAAGTTTTT CTTCTTACTC
ACATTTGCAG CAGCCATTCC AGCAATTGTA TCTGGCGGTA TTGCTGAACG CGGCAGCTTC
AGACCTTTCT TATTGGCATC TGCTTTAATT GTTGCCTTCG TATATCCGCT ATTTGAAGGG
ATTATGTGGA ACGGTAATTA TGGATTTCAA GCTTGGTTAG AAAGCCAATT CGGCGCCCAA
TTTCATGACT TTGCCGGTTC CGTTGTAGTG CATGCAATGG GCGGTTGGTT AGCCTTAGTC
GCCATTTACT TATTAGGAGC TCGCCGTGGT CGTAAACCGG GAATCGCATT TGCGCCATCA
AATATTCCCT TTCTAGCGCT AGGCTCTTGG GTGTTAATTG TCGGTTGGTT TGGCTTTAAC
GTTATGTCAG CGCAAACCCT CGACGGTATT AGTGGTTTAG TGGCGGTAAA CAGTTTAATG
GCTATGGTTG GCGGTACGAT TGTGGCACTT GTGGTGGGTA AGAATGACCC AGGCTTTATT
CATAACGGAC CACTAGCAGG CTTAGTTGCT GTGTGTGCAG GTTCTGACTT AATGCATCCT
GTTGGCGCAT TTGTGGTTGG CGGTATAGCA GGAGGTTTGT TTGTTCTGGT GTACACCAAA
TTACAGCGTA GCAACAGAAT CGATGACGTT CTAGGCGTAT GGCCACTACA CGGTTTATGC
GGTGTATGGG GCGGTATTGC TGCGGGTATT TTTGGTCAGC AGGCTTTAGG TGGTCTTGGC
GGGGTCAGCT TTATGTCGCA ACTCATTGGC AGTATTGCTG GCGTTGTGGT GGCAATTGTT
GGCGGTATGA TTGTGTATGG CGCGGTTAAT AAAGTATCGA GTTTACGCTT AAGCCAAGAA
GATGAATTTA TTGGGGCGGA TTTAGCGATA CATAAGATTG GCTCAACCAA TTCAGATAAG
TGA
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| Protein sequence | MNNISDAIGV IAQSADTLFI LLGAIMVLAM HAGFAFLEMG TVRHKNQVNA LVKILTDFAF
SAIAYFVIGY QIAYGNHFFV SAESLTTDNG YQLVKFFFLL TFAAAIPAIV SGGIAERGSF
RPFLLASALI VAFVYPLFEG IMWNGNYGFQ AWLESQFGAQ FHDFAGSVVV HAMGGWLALV
AIYLLGARRG RKPGIAFAPS NIPFLALGSW VLIVGWFGFN VMSAQTLDGI SGLVAVNSLM
AMVGGTIVAL VVGKNDPGFI HNGPLAGLVA VCAGSDLMHP VGAFVVGGIA GGLFVLVYTK
LQRSNRIDDV LGVWPLHGLC GVWGGIAAGI FGQQALGGLG GVSFMSQLIG SIAGVVVAIV
GGMIVYGAVN KVSSLRLSQE DEFIGADLAI HKIGSTNSDK
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