| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0734 |
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| Symbol | |
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| ID | 4277641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 859821 |
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| End bp | 860396 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638133505 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_749430 |
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| Protein GI | 114561917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA CGATTCTTAC TTTAGCTGGA CTTATTTCGT TAGCCTCTTT TAGTACTTAT
TCTCACGCTG ATGACTTCAA GAAAGACGTA GCTGAAAATG GCGTTTATGT CGGCGCTAAT
TATGGTTACC TAAAAGTTGA TGGCGAAGAT GACTTTGATG ACGACAATGA TGTTCTCCAG
GGCCTAGTCG GTTATCGCTT CAACAAATAC TTAGCTCTAG AAGGTAGCTA TATTGATTTT
GGTAGTTACG GCAACAACTT ATCTAGTGCT GAAACAGATG GTTATACCGC AGGTCTAAAA
GTGACATTGC CCATTGCTGA GCGAATAGAG TTATATGCCA AAGGTGGTCA GTTATGGTAC
TCAACAGATT ATGACGTAGT CGGGTTTTCT GGCAATAAAG ATGATGAAGG TGTGTTTGCC
GGTGCAGGTG TAGCGTTTAA GGTAACAGAT CGTTTTCTAA TTAATGCAGA GTACACTTGG
TATGATGCAG AAATTAACTT AGATAATGTA TCTAACGGTT CCGACACAGA AACAGACTTT
AAACAAGCTA GTATCGGTGT TGAATATCGT TTCTAG
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| Protein sequence | MKNTILTLAG LISLASFSTY SHADDFKKDV AENGVYVGAN YGYLKVDGED DFDDDNDVLQ
GLVGYRFNKY LALEGSYIDF GSYGNNLSSA ETDGYTAGLK VTLPIAERIE LYAKGGQLWY
STDYDVVGFS GNKDDEGVFA GAGVAFKVTD RFLINAEYTW YDAEINLDNV SNGSDTETDF
KQASIGVEYR F
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