| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0677 |
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| Symbol | |
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| ID | 4277218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 801030 |
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| End bp | 802082 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638133442 |
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| Product | porin |
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| Protein accession | YP_749374 |
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| Protein GI | 114561861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.127595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGT CCCAACTAAA ATCTGCAATT ATTATGCTGA GCTTTGCGGC TCCCATATTC
ACAACTCAAG CTAATAGCAA CACCGATACT AATGAGGAGT TACGAGCTGA ACTACAACAA
ATTCAGCAAA GGCTCGCCAC GCTTGAAACC CAAGACAGAG AGTCATCTTT GCTCTCAGAT
ACCCAGTTTA ATTTTTATGG TTCTTTACGT CCGACATTCG GTCTTACCCA TACCAATTCA
GATGATGTGT GGGATGTTGG AGATGCTAAC TCACGGATTG GTTTTGCGAC GGAATACCAA
TTAGGAGATG GCCTAATGGC CTTTGCTAAA GGCGAGTTTA AAGTTGATAT AAGAAATGAT
GGTGACTTTG GCGATGCACG AAAAGCCTAT GTTGGAATCG AAGGTTTTTT AGGTCGGTTT
GCTATTGGTA AGCAAGCAGT AACACAAGAA ATTATTTACG ATCCCGTCGA TATCTTCAAT
CGTTCAGGAA CCCCAATAGC CTATGACAGT GCAAGTCCAT TTAGACTTAA CAATCTAGTG
ACCTATAGAA AGCAATTCGG CGATATTTTG TTTTCTGCTG ATGCGCAATT CGATGGTAAC
AAAGGAAGTG ATGGGAGTGA TTTTTTTAAC ACCGGTTTAC GTTACAAAAC CGACCTAATC
TACATAGCCG CAGCGTTTTA CACTAAAGAA TTGGAAGACG GTACAGATGA AAATACCGTA
GGTGTCACCT TAGCTAAAAA CTTTGAGTCA CTGTACCTAG CAGCTGCTTA TCAAAACATA
GACAAAGACA TCGCCGATGG TTCAACTCTT GATATAGTCG CAAGCTACTT CATCAATGAA
ACCTATAAAA TTAAACTGGG GATATCCAAA TATGATGATG GTGGCAACAA TATCACCTCA
GGTAAGTATA ATGCCTATAA CACAACCTTT GAATGGCATA AAACATCGAA ATTCAGTACC
TTCATCGAAT ATCAGAAAAA AGATTTTGAA TACCAAGAGA CTGATGATCA AATTATGGTC
GGTATGCGTT ATAACTTCGA TTATAAGTTT TAA
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| Protein sequence | MKPSQLKSAI IMLSFAAPIF TTQANSNTDT NEELRAELQQ IQQRLATLET QDRESSLLSD
TQFNFYGSLR PTFGLTHTNS DDVWDVGDAN SRIGFATEYQ LGDGLMAFAK GEFKVDIRND
GDFGDARKAY VGIEGFLGRF AIGKQAVTQE IIYDPVDIFN RSGTPIAYDS ASPFRLNNLV
TYRKQFGDIL FSADAQFDGN KGSDGSDFFN TGLRYKTDLI YIAAAFYTKE LEDGTDENTV
GVTLAKNFES LYLAAAYQNI DKDIADGSTL DIVASYFINE TYKIKLGISK YDDGGNNITS
GKYNAYNTTF EWHKTSKFST FIEYQKKDFE YQETDDQIMV GMRYNFDYKF
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