| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0659 |
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| Symbol | |
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| ID | 4278180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 767879 |
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| End bp | 769078 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133416 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_749357 |
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| Protein GI | 114561844 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA TCATACTAAG AAGATTGTCA CCACTCTTGA TCATTATTGT ATTTGTTGGG
TTAGCCCTAG CACTTATTAG CACCCAAGAA GCTCCAGAGC AAAAAGATGA AGCTATCAGT
GTACCTATTA TTGATGTGCA AACTGTTACG CCGCAAACCT TGTCGCTTAA CTTACCCTCT
TATGGCGTGG TAAATCCCAA ATATAAAACT CAGCTTGTCA CCGAAGTTCA AGGGCGCATG
TTGAGTATTT CAGCCAATTT TGTTGCTGGT GGCGTGGTTA AAAAAGGCGA ACAACTGGCT
ATTATCGAAC CATCTGATTA CGAAGCTGAC CTTATTCAGG CCGAAGCGAC TGTCGCTCAA
GCAACAGCTG CATTAAATGA AGAAAAAGCC CGCGGTGTAG TGGCTAAAAT TGAATTTAAA
GACTTTGGCA AAGGCTTACC GCCAGAGCTA GGGTTACGTA TTCCACAACT GAAAAAGGAA
CAAGCCAACG TCAAGTATGC AGAAGCTGCA TTAGCACGCG CACAACGTAA CTTAGCGCGC
ACCGTTATTC GCGCACCATT TGACGGCATA ATTAAGGCCC GCAATGTCGA CTTAGGCCAA
TATGTCACGT TAGGCACAAA CTTAGGTGAG CTATACGACA CCAGTATTGC CGAAATCAGA
TTGCCGTTAG CAAATGAAGA TCTCGCTTAT TTAGAGTCTG TCGATAATCC TGAAACCGCA
GTGACACTCA CAGCATTGCT GGCGGGTAAG CAAGTCTCTT GGCAAGGAAA TATAGTGCGC
AGCGAAAACG TCATCGACGA ACAAACTCGC ATGGTATACC TCGTTGCTGA AATTCATGAC
CCGTATCTGC GCAACAACAA AACCGAAGGT CAGTTACCCT TAAAATACGG CAGCTTTGTT
AATGCCGTTA TCACAGGCAG AACCGTTAAT GATGTAGTAA AGCTACCTCG TCATGTGGTG
CGTAATGGTC AGGTTGCCGT AGTGAGTGCA GATAATATTA TCGAAATGCG CAAGGTGAAC
ATTATTCGCT CAGACGTTGA TACCATTTAT ATTCAAGGCA GTTTCAAGGC AAATGAGCGC
GTATCAACCA CTAGCATTAA CAGCTTGAAT TCAGGACAGG TTATCAAAGT ACTGGGCGAA
GAAACCAAGA CTGAACCAGT CGATACTGAC ACCCAAGCCG CTACGACTGC AGGTGAATAA
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| Protein sequence | MIKIILRRLS PLLIIIVFVG LALALISTQE APEQKDEAIS VPIIDVQTVT PQTLSLNLPS
YGVVNPKYKT QLVTEVQGRM LSISANFVAG GVVKKGEQLA IIEPSDYEAD LIQAEATVAQ
ATAALNEEKA RGVVAKIEFK DFGKGLPPEL GLRIPQLKKE QANVKYAEAA LARAQRNLAR
TVIRAPFDGI IKARNVDLGQ YVTLGTNLGE LYDTSIAEIR LPLANEDLAY LESVDNPETA
VTLTALLAGK QVSWQGNIVR SENVIDEQTR MVYLVAEIHD PYLRNNKTEG QLPLKYGSFV
NAVITGRTVN DVVKLPRHVV RNGQVAVVSA DNIIEMRKVN IIRSDVDTIY IQGSFKANER
VSTTSINSLN SGQVIKVLGE ETKTEPVDTD TQAATTAGE
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