| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0617 |
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| Symbol | |
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| ID | 4278417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 719609 |
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| End bp | 720568 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638133374 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749315 |
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| Protein GI | 114561802 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.468918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAA TTGACTTAGA TAAATTAGAT TTATTAACAT TATCTATATT AGTGAGTCTT
TATGAAAATA AATCAGCGAC ACATGTTTCT AGAATATTAG ACGTGCCAGC TTCAAAGATT
AGCCGTTGTT TGCACACTGC AAGACTAATA TTCGGCGATG AGTTGTTTAT TAGACGGAAA
TACGGATTAG TACCAAATGA TTATGCAGGG AAAATTTATC CCATTGCTAA GGAGATAGTG
GAGTGCGCTA AGCATTTCAA TCGACTTAAT AGTGCTGAGC AGTCGCATAA TCGATACTTT
GAATTGGTTA TCCCTGGCAT GATTGCTTAT GCTTATCCGC GAGCATTGAT GAAAGCGATT
AAAGAGCATA ATAAAAATAT TCATATTAAT GTGAGCAGTT GGAGTAGCCA TTCTTTGGAG
AGTGTCACTA GCGATCCACA CTGCATTGTG ATGTGTTGTT GTAAAGGTCC TGAAGAAATT
CTTTGTTTTG ACCAAAAACT ACAGGTTGAA GTGCTTGCGA CAATGAACCG ACAATACTTG
CTCAGTTGCA GAAAACATCC CATATTAAAG CAGGACATCT CTCTAGAAAC TATTGCTAAA
TATCCATATA TCAATACGTT TATTGGTACC CAAGCTCCCA TACTTAACCC ATTCCAGGAG
TATTGCCAGG CTAAGGATTT ATCTCTTAAT ACCGAAATGA CCATTACCAG CGTGTCTTCT
TTATTTGATT ACCTTTCAGA CTGTCAATCA CTAGCTATAA CGCCCTACAA GGCGGTGTAT
GACATGTTAG ATGATGACTC AGGTTTACAT GCTTGCCAGT TATCTGAATA TGAATGTAAT
CGTCTTTTTG AGGTTGTAGA GCCATTAAAG TTGGTCTTAG TCACTCATCC TAGTGCTGAT
AATGAAGATA CTGCATGGTT AAAACAACAA ATTCGTGAGT TAACCCATGA GCTTATTTAA
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| Protein sequence | MKPIDLDKLD LLTLSILVSL YENKSATHVS RILDVPASKI SRCLHTARLI FGDELFIRRK
YGLVPNDYAG KIYPIAKEIV ECAKHFNRLN SAEQSHNRYF ELVIPGMIAY AYPRALMKAI
KEHNKNIHIN VSSWSSHSLE SVTSDPHCIV MCCCKGPEEI LCFDQKLQVE VLATMNRQYL
LSCRKHPILK QDISLETIAK YPYINTFIGT QAPILNPFQE YCQAKDLSLN TEMTITSVSS
LFDYLSDCQS LAITPYKAVY DMLDDDSGLH ACQLSEYECN RLFEVVEPLK LVLVTHPSAD
NEDTAWLKQQ IRELTHELI
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