| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0547 |
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| Symbol | |
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| ID | 4278715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 626923 |
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| End bp | 627834 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133305 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749246 |
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| Protein GI | 114561733 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.444887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATT TGAACGGTAT GATGCTGTTT GCAGCCGTTG TTAGAGCAAA AGGATTCTCT
CAAGCAGCAC GAGAGATCGG ACAACCTAAA TCAACCATTA GTCGTAAAGT TGCTCAATTA
GAAGAACAAC TCGGAGTACG ATTACTGCAA CGAGACACCC GAAATTTAAG TCTGACTCAA
GTAGGCGCAT TATTTTTTCA GCACTGTGAT TCTATTAGTC ATGAAATTGA AGCGGCCAAA
GCCACCATAG AAAACACCCA TAATGATATT TCTGGTGCGT TGCGCATCGC CATTCCGGTG
TCTTTTTCAC AAGATGTTAT CGGCCATTTA TGTTCTAGTT TTATGCGCCT TTATCCCAAT
ATAGAACTCG ATATTCAATT TACCGATAAC GATGTCGGGC TTGTGGGTGA AGGTTACGAT
ATCGCGATCA AATATGGTCC TCTACAGTCA TCTGATCTTG TGGCCAGGTT ATTATTTGAA
CGCCAACCTA TTTTGGTCGC AAGCCCTGGT TACATTAAAA AATTCAGTAG TCCTGCAACA
CCACAAGAAT TAACTCAGCA TAACGGCATT TTACTCGGCA CTACATTGTC GGCACCCATT
TGGGCATTAG GTAAAGGTAA CCGTAAAATA ATGGCGACCT TTAAACGTAA AGTGCGAGTT
AATAGCGCCA GTATGGTGAA GCGCTTAGCG TTGGATGATT ATGGTATTGC CATGCTTTCT
AATACTAGTT GCAAGCAAGA ACTTGCAACC GGAAGCCTGG TGCCCATTTT ACAGGAATGG
CCAATGGAAC CCTTTAAAGT ATACGGGGTG TATTCAAGTC GCCGTCAGCT AGCCAGTAAT
ATTAGTGCTT TTTTAGACTT CTTTACCAAA CGATATACCA GCCAAGAATC ACTACATTCG
ATGATGAGTT AA
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| Protein sequence | MPDLNGMMLF AAVVRAKGFS QAAREIGQPK STISRKVAQL EEQLGVRLLQ RDTRNLSLTQ
VGALFFQHCD SISHEIEAAK ATIENTHNDI SGALRIAIPV SFSQDVIGHL CSSFMRLYPN
IELDIQFTDN DVGLVGEGYD IAIKYGPLQS SDLVARLLFE RQPILVASPG YIKKFSSPAT
PQELTQHNGI LLGTTLSAPI WALGKGNRKI MATFKRKVRV NSASMVKRLA LDDYGIAMLS
NTSCKQELAT GSLVPILQEW PMEPFKVYGV YSSRRQLASN ISAFLDFFTK RYTSQESLHS
MMS
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