| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0540 |
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| Symbol | |
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| ID | 4276960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 619548 |
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| End bp | 620585 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133298 |
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| Product | rRNA (guanine-N(2)-)-methyltransferase |
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| Protein accession | YP_749239 |
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| Protein GI | 114561726 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAACAA ATCCATCTCA AGCGTTAATT AGAAACAGTA AATACTTTCA GCAACATAGT
GTGTTAGTGC TCAATTATGA AGCTGATACC TTTGCACATC AATGTCTTGA GTTTGCCGAT
AATGTCACCG CCCTAGCGCT AGATTATAAT CATCATCTCA CATTGTCCTC TTGCGCCAAT
GAAAAATTAC AAAGCTATTT TGGTCATCAA CTGCCAGAGT CATTAGCTGA TACAAAATTT
GATAGCGTCA TTATTTACTT TCCCAAAGCA AAACCGTTAA TGGGTTATTT ACTGCAACTG
GCTGCACAGC ATTTGAATGT TGACGGCCAA TTGATCATTG TGGGTGAAAA TAAAGGTGGG
ATTAAATCGA TTGCAAAACT CACACCTGAT TATTATTCGC AGCCAATCAA ACAAGATAAT
GCCCGCCACT GCTTGGTATA TGTCAGTTAT TTAATCCAAG CAGCACCAAC GCTATCGATA
AGAGATTGGG TAAGCCAATA TTCACTAGAG ACTCCACAGG GAACACTGCA AATTTGTAAT
GCTGTCGGTG TTTTCAGCGA GAAACGTCTT GATCAGGGTA CCGATTTACT GCTGTCACAT
TTACCGGATA ACTTACGCGG CAGAGTACTC GATTTTGGTT GTGGTGCAGG GGTCATTACA
GCTGCGCTGC TAAAAGCCAA TCCAGAGTTA ACCATTGAGT GCATTGATAT CAATGCAATG
GCGTTACTCT CATGTGAATT AACCCTAGCA GCCAATAGTA TGCAAGCAAA GGTCTATCCT
TCTGATGGAT TTAATCAAAT CACAGGCAAG TTCGATGGCA TTATCTCCAA CCCGCCGTTT
CATGATGGGT TAACCAGCAC GACAGATATT GCTACACAAT TTGTCCAGCA AAGTGCCATT
AGGCTAACAT CAAATGGCAT ATGGCAAATT GTCGCAAATC GTCATTTACC TTATTCAGAG
ACTATAGCGA CGCATTTTGG CAAAGTGAAT GTGGTAGCAG AAAACAATAA GTATAAATTG
TATCTCCATC AACGATAA
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| Protein sequence | MLTNPSQALI RNSKYFQQHS VLVLNYEADT FAHQCLEFAD NVTALALDYN HHLTLSSCAN
EKLQSYFGHQ LPESLADTKF DSVIIYFPKA KPLMGYLLQL AAQHLNVDGQ LIIVGENKGG
IKSIAKLTPD YYSQPIKQDN ARHCLVYVSY LIQAAPTLSI RDWVSQYSLE TPQGTLQICN
AVGVFSEKRL DQGTDLLLSH LPDNLRGRVL DFGCGAGVIT AALLKANPEL TIECIDINAM
ALLSCELTLA ANSMQAKVYP SDGFNQITGK FDGIISNPPF HDGLTSTTDI ATQFVQQSAI
RLTSNGIWQI VANRHLPYSE TIATHFGKVN VVAENNKYKL YLHQR
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