| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0508 |
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| Symbol | |
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| ID | 4278588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 575637 |
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| End bp | 577280 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133266 |
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| Product | sigma54 specific transcriptional regulator, Fis family protein |
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| Protein accession | YP_749207 |
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| Protein GI | 114561694 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CACAATTAGA TCTTCGTGAA CTCCTAGCAT TTAAACCTCG TGGCGGCACG
ATGAGCTTTC TTGGTCAGAG AACTTACCTC ACCGATATGG TGTCCCATGG AATACTCAGA
AAAGAGTTAC TCAGCACCGT CGATTCTAAC GTCACTCGCA CAATAATTAC TCGTTCAGGT
TTCATTAGAG GATGGTTATT AGCGGAACAA ATAAAACGTA AAATGCCTGA AGTATGGTCA
GAAGCAAGAC AGGGGAAACT AGGCCCAATG GTTTGTTCTA TGTTTGGCTT TGGCGAGGTG
CTTACGAGTC ATCGCACCGA TGGCCTGTCA GGCGCACCAC TGGTTGAAAC TTACTTTATC
GGTTCCTATG AAGCAGAACA GCAACTACGT TTAAGTGGCC AATCTCAAGA TGTAGTTTGT
TGGGAACAAG TTGGATTCGC GAGTGGCTAT GTTTCTCACG TTCAGCAACG TACGGTCTAT
TTCATTGAGT CAGAATGCCA AGCTAAAGGT GATTGCCACT GTCACCTTAT CGGAAATTAT
GCCGAAAAAT GGACTGAAAA AGACACTCTT TCACTCCATT ATTATAATGG TATCAACATA
GAAAATATTA AAACCGAAGT AGAAGAAATA TTAAAAATAG AAGAATATTT CCCACGAAAT
GTTCATTCTA ATATTGATCT AGACACTCCA AATGATTATG TCCAAAGTGG CTATCCCATT
ATCAATAGTT ATCCGATGAA AAAACTCATT GAAATGGCCA TTAACGTCGC CAAAGTACCC
ACATCTATTT TTGTCACTGG CGAAAGTGGT GTCGGCAAAG AGAAATTAGT TGATTTTATT
CATCGCCTCT CCGATAGAAA TAATAAACCG TTACTGGCGA TAAACTGCGG TGCACTAACT
GAATCTCTAT TAGACAGTGA ACTATTTGGT CATGTAAAAG GCGCGTTTAC AGGGGCTGAA
AATAACAAAA TGGGATTGAT CGAAAGTGCC AACGGTGGAA CACTATTCCT CGATGAAGTC
GGCGAACTTT CTCCCTCAAT GCAAACTAAA CTACTGCGAG TGATTCAAGA AAAACAAATT
CGCCGAGTGG GTGACAACAA TATCAAAGAT GTCGATGTTC GAATAATATC GGCAACCAAT
AAAGATTTAG AAGCTGCGGT TGAAGCAGGT GATTTCCGTC AAGACCTTTA CTACCGACTC
AATGTTATCG AACTCAAAAT CCCTCCACTA AGGAATCGAG GAGAAGATAT TTTACCCTTA
GCGCGCTGTT TTCTGTCCGA TTTCAATGAA AAACTGGGTA GAAAAATCAC TGGTTTTAAC
TACAAAACAG CAGATTTATT ACTCAACTAC GACTGGCCAG GCAATATTCG TCAACTCGCC
AATACGATTG AACGGGCGGT AGTGTTAAGT CCCGGGCCAC AGATTATGCC TGAAGACTTA
CCAGAAGAAT TTCATCAAAA TATCACTAAA CCATCGATAA ATAATGGTAT TAAACCACTT
AATACCATTG AAAAAGACTA TATAGTCTCG GTATTAGAAA CCCTAAATAA TAACAAAGCA
CTCACAGCCA AAAAACTCGG AATGAGCCTC GCGACCCTAT ATCGAAAGTT GAAAGAATAT
GATGAACTTC AAAATTTCGA TTAA
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| Protein sequence | MKTSQLDLRE LLAFKPRGGT MSFLGQRTYL TDMVSHGILR KELLSTVDSN VTRTIITRSG
FIRGWLLAEQ IKRKMPEVWS EARQGKLGPM VCSMFGFGEV LTSHRTDGLS GAPLVETYFI
GSYEAEQQLR LSGQSQDVVC WEQVGFASGY VSHVQQRTVY FIESECQAKG DCHCHLIGNY
AEKWTEKDTL SLHYYNGINI ENIKTEVEEI LKIEEYFPRN VHSNIDLDTP NDYVQSGYPI
INSYPMKKLI EMAINVAKVP TSIFVTGESG VGKEKLVDFI HRLSDRNNKP LLAINCGALT
ESLLDSELFG HVKGAFTGAE NNKMGLIESA NGGTLFLDEV GELSPSMQTK LLRVIQEKQI
RRVGDNNIKD VDVRIISATN KDLEAAVEAG DFRQDLYYRL NVIELKIPPL RNRGEDILPL
ARCFLSDFNE KLGRKITGFN YKTADLLLNY DWPGNIRQLA NTIERAVVLS PGPQIMPEDL
PEEFHQNITK PSINNGIKPL NTIEKDYIVS VLETLNNNKA LTAKKLGMSL ATLYRKLKEY
DELQNFD
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