Gene Sfri_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0486 
Symbol 
ID4278550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp552269 
End bp552994 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content50% 
IMG OID638133244 
Producthypothetical protein 
Protein accessionYP_749186 
Protein GI114561673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.434218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA CTGACTTTAC ACTTAAGCCC AGCTTAATTG CCATGCTGGC TGCTGCAACC 
CTGCTTACCG CCTGTGGCGA TGACAACGAT GATGATACTA CTGTTGTTGT CACCCCGCCT 
GCGCCAGTGA TGCAAACCTT CACGGTGACC GTGACTAACC TGACGGCTAA CCAACCAATG 
TCGCCGGTTA TCTTAGCCTC TCATGCTAGT GATGCCATGT TATGGAACGC CGGTGAAATG 
GCCAGCGAAG CGATAGAGAA AATAGCTGAA GGTGGTGATA CTGCCGACAT AGCAGCACTA 
AGCGTGATCA AAAGCAGCGT TAACGGCACA GGCTTATTAA TGCCTGGTAT GTCAGAAACG 
CTGACCTTGA CCCTAGATGA AGCCGACGTA GCGAGCATTA GTTTAGCCAC CATGTTGGTT 
AACACTAACG ATGCCTTTAC CGGTATTAAC AGTTACACCA TTGCCGGAAT GGAAGTGGAC 
GCTACAACCG CGATGAAGTT TATGGCTTAT GATGCTGGCA CTGAAGCCAA CAGCGAAGCC 
AAAGGCACTA TGCCAGGACC CGCTGATGGC GGCGAAGGCT TTAACGCCAG CCGTGATGAT 
GTCGACTTTG TGCATATTCA TCCGGGTGTT ATTTCAATGT ACGACGGCTT AACAGATTCG 
GTACTGGGTG CATCGCACCG TTTTGATAAC CCGGTGTTAG CTGTCACTAT TATGCGTACT 
GAATAA
 
Protein sequence
MKRTDFTLKP SLIAMLAAAT LLTACGDDND DDTTVVVTPP APVMQTFTVT VTNLTANQPM 
SPVILASHAS DAMLWNAGEM ASEAIEKIAE GGDTADIAAL SVIKSSVNGT GLLMPGMSET 
LTLTLDEADV ASISLATMLV NTNDAFTGIN SYTIAGMEVD ATTAMKFMAY DAGTEANSEA 
KGTMPGPADG GEGFNASRDD VDFVHIHPGV ISMYDGLTDS VLGASHRFDN PVLAVTIMRT 
E