| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0468 |
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| Symbol | |
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| ID | 4277081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 536130 |
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| End bp | 536945 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133226 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_749168 |
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| Protein GI | 114561655 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAT ACATCGACAT TGCAGTCAAT CTGCTTAGCG ACAGGCTTAA GCACGATATT
GACACTATTA TCAATGACGC GGCGAAACAT CATGTTTCGC CGTTAATTAT TATTGGCAGC
GATCTCGATG AAAGCTCCGA CTCAATATCT CTCTGCCAAC AATACCCGCA ACAACTCTAC
TGCACTACAG GTGTTCACCC GCATCATGCA TCGTCTTGGG ATCAACACAG CAAAGCACGT
TTAACTCAGC TTGCCACACA AGAAACAGTG GTTGCTATTG GTGAGTGTGG ACTTGACTAC
AATCGCGACT TTTCACCTCG TCTTGCACAA AGAAAGGCAT TTGCAGCGCA ATTAGAGCTG
GCTTGCGAAC TCAATATGCC TGTACTTATG CATTGTCGTG AAGCACATAG TGATTTTATC
GCCATTGTAA ATGAGTACAG AGCTCAACTC CCTAATGCTT TATTGCACTG TTTTACTGGC
AGTAAAGATG AGTTATTTGA ATGCTTAGCG GCTGATTTAT ACATTGGCAT TACAGGTTGG
ATTTGTGATG AACGCCGAGG ACAAGAGCTC GCTCAATTAG TGCCGTTGAT TCCTAGTAAT
CGCATTATGG CAGAAACCGA TAGTCCTTAC TTATTACCTC GTAGTATGCG GCCTAAACCT
AAGTCGAGTA GAAACTTACC CCAATACTTA CCTTATATTG TCGAGTATAT GGCTAATTTA
CGCCAACAAT CACCGCAAAC ATTGGCGCAA GAATGTTATA AAAACAGTTG TGATTTTTTC
CAACTGCCAG TTCATCTAAA CGTGAATAAT AACTGA
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| Protein sequence | MTQYIDIAVN LLSDRLKHDI DTIINDAAKH HVSPLIIIGS DLDESSDSIS LCQQYPQQLY
CTTGVHPHHA SSWDQHSKAR LTQLATQETV VAIGECGLDY NRDFSPRLAQ RKAFAAQLEL
ACELNMPVLM HCREAHSDFI AIVNEYRAQL PNALLHCFTG SKDELFECLA ADLYIGITGW
ICDERRGQEL AQLVPLIPSN RIMAETDSPY LLPRSMRPKP KSSRNLPQYL PYIVEYMANL
RQQSPQTLAQ ECYKNSCDFF QLPVHLNVNN N
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