Gene Sfri_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0431 
Symbol 
ID4278408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp476886 
End bp477536 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID638133189 
Producthypothetical protein 
Protein accessionYP_749131 
Protein GI114561618 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGG CCCTTTTAGT TTCATGTTTA TATGCCGCAC CGACACAAGA ATTAAATCAG 
CAAAAAACCG TGTCGGCTTT ATCGAAACGT TATGGCGATC GAGCAGGATT ACGAGCAAAC 
GCTTGGTTTA AAATTGTCAA TGATTCGCAA CAACTTGCTG AAATTGATAA GTTAGAAAAA 
GTTAATCAGT TTTTTAATTT ATTTCGATTC ATTGATGATC AAACACTATG GGGTGATTCC 
AATTATTGGG CATCACCGAT GGAGTTTATT GGGGTTAACG GAGGTGATTG TGAAGACTTC 
TCAATCGCAA AGTATTTTAC CCTTCTCCAG CTTGGTATCC CGGAGGATAA ACTCCGAATC 
ACTATGGTAA AAGCCACATC GCTGAATCAG TATCATATGG TATTAGCGTA CTACGAAAAG 
CCTAATTCGA TTCCGTTAGT GCTCGATAAT TTGGATAAAA CCATAAAATT GGCAACAAAA 
CGAAAAGATC TTCTGCCTGT TTACAGTTTT AACGGTAAAC AATTATGGCT AAACAAAGAA 
AGAGGCCGAG GTGTGTTAGC AGGTTCATCA TCACGCCTTG AAAAATGGAC TGACCTTAAA 
CTTAGATTAG GTGTAGACCG CTTACGCCAA CCCAAACTCA ACATGGAGTA G
 
Protein sequence
MTSALLVSCL YAAPTQELNQ QKTVSALSKR YGDRAGLRAN AWFKIVNDSQ QLAEIDKLEK 
VNQFFNLFRF IDDQTLWGDS NYWASPMEFI GVNGGDCEDF SIAKYFTLLQ LGIPEDKLRI 
TMVKATSLNQ YHMVLAYYEK PNSIPLVLDN LDKTIKLATK RKDLLPVYSF NGKQLWLNKE 
RGRGVLAGSS SRLEKWTDLK LRLGVDRLRQ PKLNME