| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0419 |
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| Symbol | |
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| ID | 4277751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 456801 |
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| End bp | 458108 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133172 |
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| Product | hypothetical protein |
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| Protein accession | YP_749119 |
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| Protein GI | 114561606 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.794488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTCT CTGATAATTT ATTGATCATC TTGTGCCTGA TCGGCATTAG TTGTTTTTTT
TCTATGTCTG AAATTGCCCT AGCGGCATCA CGAAAAATGC GTTTACAATT AATGGCCGAT
GAGGGCGATT TGCGCGCCGC TAAAGTGCTT AAACTTCAGG CGCATCCAGG CAGTTTTTTT
ACCGTGGTAC AAATCGGACT CAATGCGGTC GCGATTATGG GCGGTATTGT GGGTGAATCG
GCCTTTAGAC CTCATTTTGA ACAATTACTG TTGCCTTTAC TCGGCAATGA ATGGGGTTTA
CAGCTGAGTT TTGTTTGTTC ATTTGTGACG GTTACCTCGT TGTTTATTTT ATTTGCTGAT
TTGATGCCTA AACGAATTGC GATGGTGATC CCAGAGCAAG TCGCGGTCAC TTTTGTAATG
CCAATTATTT TGTGTATTAA AGTGTTAAAG CCGTTTGTGT GGATTTTTAA TGGCTTGGCC
AATGCAATTT TTAAATTGTT GCAAGTTCCT ACAGCACGTA ACGACCAAGT CACCCATGAT
GATATTTACG CCATGATGAC AGCAGGTACT GAAGCTGGGG TGATGGATAA AGGCGAACAA
CAAATGATGG AAAACGTGTT TGAAATGCAG TCTGTTTCGG TAACCTCTGC AATGACGGCG
CGTGAAAGTT TAGTGTATTT TTTACTGCAA GACAGTGAAG ATGACATTAA ACAGAAAATT
GCTAAAAATC CGCATAATAA GTTTCTCGTT TGTGATGGCC AACTGGACAT GATCAAAGGT
TTTGTTGATG CAAAAGAGTT ACTGATTAGG GTAATTAACG GCGAGAACAT TACCTTAAAA
GGTAGTACGT TAGTGCATAA CTGTCTCATC ATTCCTGATA CGTTAACCTT GTCTGAGTCG
ATGGAATATT TTAAGAATAA TCGTTCCGAC TTTGCGGTGG TGATGAACGA ATATGCTTTG
GTTGTTGGCA TTGTTACCAC CAATGATTTA CAAAGTGCCG TTATGGGCGC TTGGTCATTA
CATGAAAGTG AAGAACAAAT TGTTGCCCGT GATGGTAACT CTTGGTTAGT CGATGGGGTG
ACACCGATTA CTGATGTAAT GCGAGCATTT AATATTGAAG TGTTTCCGCA TAATCAAAAT
TACGAAACCA TTGCTGGTTT TATGATGTAT ATGTTGCGCA AAATTCCTAA ACGTACTGAT
TTTGTCAATT ATGCGGGTTA CAAATTTGAG GTAGTCGATA TTGATTCATA CAAAGTCGAC
CAACTACTGG TTACTCGGCT AGACATTGAG ACGCCGCCTC TGCCTTAA
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| Protein sequence | MSLSDNLLII LCLIGISCFF SMSEIALAAS RKMRLQLMAD EGDLRAAKVL KLQAHPGSFF
TVVQIGLNAV AIMGGIVGES AFRPHFEQLL LPLLGNEWGL QLSFVCSFVT VTSLFILFAD
LMPKRIAMVI PEQVAVTFVM PIILCIKVLK PFVWIFNGLA NAIFKLLQVP TARNDQVTHD
DIYAMMTAGT EAGVMDKGEQ QMMENVFEMQ SVSVTSAMTA RESLVYFLLQ DSEDDIKQKI
AKNPHNKFLV CDGQLDMIKG FVDAKELLIR VINGENITLK GSTLVHNCLI IPDTLTLSES
MEYFKNNRSD FAVVMNEYAL VVGIVTTNDL QSAVMGAWSL HESEEQIVAR DGNSWLVDGV
TPITDVMRAF NIEVFPHNQN YETIAGFMMY MLRKIPKRTD FVNYAGYKFE VVDIDSYKVD
QLLVTRLDIE TPPLP
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