| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0387 |
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| Symbol | |
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| ID | 4278227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 416488 |
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| End bp | 417081 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133141 |
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| Product | phosphoheptose isomerase |
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| Protein accession | YP_749088 |
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| Protein GI | 114561575 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0279] Phosphoheptose isomerase |
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| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.889842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGAAC GTATTAGAGA TAGTTTCACC GAATCGATTC AGACTAAAAT TGATGCTGCA
GAAGCATTAC CTGAGTCTAT TGAAAAAGCT GCAGAGATGA TGGTGCAATG TCTACTTGGC
GGTAATAAAA TTCTGTCATG TGGTAATGGT GGCAGTGCTG GCGATGCTCA ACACTTCTCA
GCTGAATTAT TAAACCGTTA CGAAATTGAA CGTCCACCGC TGCCTGCTAT AGCATTAAGC
TGTGATACTT CAACGATTAC CGCTATCGCC AACGATTATA GCTACGATGA AATCTTCTCG
AAGCAGATTT TTGCACTGGG TCAACCAGGC GATATTTTAT TGGCTATCTC AACCAGCGGT
AACTCTGGCA ACATTATTAA AGCCATGGAA GCAGCGTTAA GCCGCGACAT GACTATTGTA
GCCCTAACAG GTAAAGATGG CGGCGCAATG GCTGGCTTGA TGAGCGCAGG AGATGTCGAA
ATCCGCGTAC CGTCAAACGT TACTGCACGT ATTCAAGAAG TTCACCTACT GGTTATTCAC
TGCTTATGCG ATAACATCGA CCGCACCTTG TTCCCACAGG ATGAACAAGC ATGA
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| Protein sequence | MLERIRDSFT ESIQTKIDAA EALPESIEKA AEMMVQCLLG GNKILSCGNG GSAGDAQHFS
AELLNRYEIE RPPLPAIALS CDTSTITAIA NDYSYDEIFS KQIFALGQPG DILLAISTSG
NSGNIIKAME AALSRDMTIV ALTGKDGGAM AGLMSAGDVE IRVPSNVTAR IQEVHLLVIH
CLCDNIDRTL FPQDEQA
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