| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0382 |
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| Symbol | |
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| ID | 4278798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 412225 |
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| End bp | 412914 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133136 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_749083 |
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| Protein GI | 114561570 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAT GGTCAAATAT TCGTGCAATC GCCTTTGATT TAGATGGTAC GCTGATCGAC
AGTGTGCCTG ATTTGGCCGC GGCCACCAAT GCCACATTAG CACAGAACCA ATACCAACCA
GTGACAGAAG CATTGGTTCG CAGCTGGGTA GGTAATGGTG CCCAAGTACT AATGCAACGA
GCGTTAAGTT ATGTGTCTGC TATGCCAGAA GATGCTCCTG AGCTGCAGGT AATGCTTGAG
CAAATTATGC CGCAATTTAT GCATCATTAT GGTGAACACT TACAAAAACA TAGCCGTTTG
TATCCGGGAG TTGTCGACAC GTTACAGCTG TTAAAACAAG CAGGTTTTAA ACTGGCTATC
GTTACCAATA AACCATATCG TTTTACAGTG CCGTTACTAA CCGCCTTTGG TCTTGATGAC
CTATTTTCCG AAGTTCTCGG TGGCGATTCA TTGGCAAAAA TGAAGCCAGA TCCAATGCCA
TTACAACATT TGCTTAAACA ATGGCAGTTG GATGAATCGC AATTACTGAT GATAGGTGAT
TCAAAGAATG ATATTTTAGC GGCTAAAGCT GCGAATGTTA TGTCTATTGG CTTGACCTAC
GGATACAACT ACGGCGAAGA TATCGGTCTT AGTCTTCCGC ATGCGATATG CGAAAACTTT
GCTGATATAG AGCAATACTT ACTTTCATAA
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| Protein sequence | MMQWSNIRAI AFDLDGTLID SVPDLAAATN ATLAQNQYQP VTEALVRSWV GNGAQVLMQR
ALSYVSAMPE DAPELQVMLE QIMPQFMHHY GEHLQKHSRL YPGVVDTLQL LKQAGFKLAI
VTNKPYRFTV PLLTAFGLDD LFSEVLGGDS LAKMKPDPMP LQHLLKQWQL DESQLLMIGD
SKNDILAAKA ANVMSIGLTY GYNYGEDIGL SLPHAICENF ADIEQYLLS
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