Gene Sfri_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0271 
Symbol 
ID4278074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp299939 
End bp300697 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content42% 
IMG OID638133025 
Producthypothetical protein 
Protein accessionYP_748972 
Protein GI114561459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAG CAGCAAGAAC ACTCCATAAA TGGCTGATGC TGTTTCTCGG GCTACAGTTT 
GTGATTTGGT CAGTGACAGG AACATATATG GTGTTTATGC ATATTGACTA TATTCATGGT 
GATTCGCTAA TCAGTAACCC TCAAACAAAA ATCAACCCCG ATAAACTGCA GTATTCATTA 
GCAAAACTGT TACAAACTTA TCCTGAAGCA GAGCAAATAA GCGTCGGTAA ACTGATGCAA 
CAAGACGTAT ACCGCTTCTC TATTCCGGCC ATAAATACGA CCATAATCAC GACTCAGCAA 
GTAATGCTAA ATGCGCAAAC AGGTGAACGT TTATCGCCAC TTAACCAAAC GGCAGCCATA 
GCATTAGCCC AATATTATTA CCTTGGTAAT GAATCCATTA CCAAGGTGAG TTTACTGAAC 
GACAATCCAC CTTTTGAACT CAGTGCTCGT CACTTACCGG CTTGGCGAAT TAATTTCGAC 
CATTTTTCCG CCCCCTCACT TTACATCTCG GCTGACAGCG GATTAGTAGT AGGTAAGCGC 
CATGCATTTT GGCGTTTATT CGACTGGATG TTTCGCTTTC ATGTGATGGA TTATGGCGAT 
GCTGAAGAAA TCGATAACCA ATTATTATTC TGGATAGCGT TGTTCTCAAC TTTAGCCACC 
GTTAGCGGGT TAATATTAGT GTATTTCAGG GTATTACGTC GTACTAAAAA CAAACGTAAG 
TCTATGTTGA GCAAGCGTAA ACACAGTGGG GTTGCCTAA
 
Protein sequence
MHKAARTLHK WLMLFLGLQF VIWSVTGTYM VFMHIDYIHG DSLISNPQTK INPDKLQYSL 
AKLLQTYPEA EQISVGKLMQ QDVYRFSIPA INTTIITTQQ VMLNAQTGER LSPLNQTAAI 
ALAQYYYLGN ESITKVSLLN DNPPFELSAR HLPAWRINFD HFSAPSLYIS ADSGLVVGKR 
HAFWRLFDWM FRFHVMDYGD AEEIDNQLLF WIALFSTLAT VSGLILVYFR VLRRTKNKRK 
SMLSKRKHSG VA