| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0242 |
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| Symbol | |
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| ID | 4278675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 269934 |
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| End bp | 270740 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638132996 |
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| Product | bioH protein |
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| Protein accession | YP_748943 |
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| Protein GI | 114561430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTTTC CTGCATTGCA TATTGATACC GTTGGCTCAC AAGGCCAAGA CATAGTGCTA
TTACACGGTT GGGGGGTGAA TAACCAAGTC TTTAGTCCAT TAAAAAACGC ATTGCACCAG
TATAGAGTGC ATTATGTGGA TTTGCCGGGT TTTGGGTTAA GTCCTAATAT CGACGGAGGA
ATAACGCAAT GGTCACAAGC ACTTGCAGAG CAACTTCCAC AGCAGGCGAT TTGGATTGGT
TGGTCGCTAG GTGGGTTAAT CGCTAGCCAA ATTGCCATCG ATTACCCAGA GTCAGTGGCT
GCATTAGTCA CTATTGCCTC ATCCCCATGT TTTATGGCCC GCGAAAGTGT TATGACTAGT
GGAATAGATG ATATCAGCCC CGCCTGGCCT GGTATTCAGC CTGATGTATT GGCACAATTT
TCAAGCCAAT TAAGTCGCGA TTTGTCTCGT ACTGTTGAAC GATTTCTGGC GATTCAAGCC
ATGGGAAGTG ATAACCCCAA AGCTGACATC CAACAAATAA AAAGCTTAGT GTTAAGCAAG
CCATTGCCGA CACAACAAGG TTTATCCCAA GGATTGGATA TGTTAGCGCA GGTGGATTTA
CGTGCCACGA TCACTCAAAT ACAGCGGCCA TGGTTACGAA TTTGGGGAAA GTTAGATAGT
TTGGTGCCGA GAAAGATTAT CTCGTCATTA CCAAGCAGTG ACAACATTGA AGATGTGCTG
CTCCATAAAG CATCCCATGC GCCGTTTATT TCGCATCCTG ATGCATTTTT AGACCATTTA
TTACCGTGGA TCACAAAATA CCGCTAA
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| Protein sequence | MSFPALHIDT VGSQGQDIVL LHGWGVNNQV FSPLKNALHQ YRVHYVDLPG FGLSPNIDGG
ITQWSQALAE QLPQQAIWIG WSLGGLIASQ IAIDYPESVA ALVTIASSPC FMARESVMTS
GIDDISPAWP GIQPDVLAQF SSQLSRDLSR TVERFLAIQA MGSDNPKADI QQIKSLVLSK
PLPTQQGLSQ GLDMLAQVDL RATITQIQRP WLRIWGKLDS LVPRKIISSL PSSDNIEDVL
LHKASHAPFI SHPDAFLDHL LPWITKYR
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