Gene Sfri_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0240 
Symbol 
ID4278673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp267322 
End bp269358 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content43% 
IMG OID638132994 
Productsulfatase 
Protein accessionYP_748941 
Protein GI114561428 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAA ATTTCTTTAG TCTTGGTACC AATTCAAGTG AGTTTAGTAC AAAAAAGACT 
TCGAATAATT TATTTCAAGC AATTGTTATA TTTAGTGTTA TCTCTCTTCT TATAATGAGT
TTGAGCCGTA TTGGCTTGTC TTTATGGCAA GCTGAACGGG TATCCGATGC CCAAGGTTGG
GGCTACATTT TACTGCAAGG TTTACGGGTC GATTTTGCCT CTTTATGTTG GCTGTGGGGT
ATTGCAGCAC TCGGAACCGT GGTATTTGCT GGTGAGCATT TAGTTGGCCG TGTTTGGCTG
ATGATATTAC GCGTATGGCT CACACTAGGT TTGTGGGTGG TAGTTTTTCT TGAGGCATCA
TCGCCGTCGT TTATTGCTGA ATATGGTTTT AGACCTAACC GTTTATATGT TGAATATCTG
GTTTATCCAA AAGAAGTGTT ATCGATGTTA TGGGCAGGGC GTAAAGGCGA GCTTATTTTA
TCGGCGCTGA TCACCGTGGG TACCTTATGG GGTGGCTGGT GGTTAAGTGG AAAATTAACG
CAATATATTC GTTTTCCTAA ATGGTATTGG CGTCCAGTGC TTGCGGTTAT CGTCATTGCT
ATTACGGTGC TAGGTGCGCG GTCATCATTG GGGCATCGAC CTCTTAATCC TTCATTGGTG
GCATTTTCAG ACGATCCTTT AGTTAATTCT TTAGTGTTGA ATTCCTCTTT CTCATTAATT
TTTGCAATTA AGCAAATGAG TAACGAAGAA GATGCATCGA AAGTGTATGG CAAGTTAGCC
GACGAAAAAG TGATCGACAT TGTGCGCCGT GAAAGTGGCC GACCACTGAG TGCATTTACC
TCATCGACCA TACCGACGTT GTCATTTAAT CAAGCCAGCT ATACCGGTAA ACCAAAGAAC
CTTGTGATCA TTTTACAAGA AAGCTTAGGT GCACGTTTTG TGGGAAGTTT AGGTGGCTTA
CCGTTAACGC CTAATATTGA TGAGCTTTCT CAACAAGGGT GGTTTTTTGA AAATTTATAC
GCTACTGGTA CACGTTCAGT AAGAGGTATA GAAGCGGTGA CAACCGGTTT TACACCTACG
CCAGCACGTG CAGTTGTGAA ACTCGGTAAG AGTCAAACAG GCTTTTTTAC CATCGCTGAT
TTATTGAAGC AACATGGCTA TACCACGCAG TTCATTTATG GTGGTGAAAG CCATTTTGAT
AATATGCGCA GCTTCTTTTT AGGCAATGGT TTTACTGATA TTGTTGATCA AGGTGACTAT
AAAGACCCAG CGTTTGTGGC GTCTTGGGGG GTGTCTGATG AGGATTTGTT GTTTAGAGCC
GACGAAGAGT TTTCGCGGAT GCACAAAGAG GGTAAACCAT TCTTTAGCTT AGTGTTTAGC
TCAAGTAATC ATGACCCATA TGAGTTCCCT GATGACCGTA TTGAGTTGTA TGAACAACCA
CAATACACCA TGCATAACGC GGTGAAATAT GCCGATTATG CAGTGGGTGA GTTTTTCAAA
AAAGCTAAAA AATCAGATTA CTGGAAAGAT ACCTTATTCC TGATTGTTGC AGATCATGAC
AGTCGAGTGG GTGGTGCTGC ACTAGTACCA GTGTCTCGTT TCCGTATTCC TGGGCTTATT
TTAGGTGACG GGATTGATGC GAAGCGCGAT CCACGTGTTG TGAGCCAAAT TGATATGTCA
CCGACGTTAA TTTCGTTGCT GGGTATTTCG GATAGTTATC CAATGCTAGG CCGTGATTTA
ACTAAAATGC CAGACTCATG GCCGGGTCGA GCGATGATGC AGTATGACAA AAACTTCGGT
TTACTGGAGG GAGATAAAAT GACTATTTTA CAACCTGAAT TACCTCCTGA AAGTGTTACT
TATGATTTTG TTACTGAAAA ACTGACTCCG ACAACGTTGA ATGAACCTCA AGCAGAAGCT
GCATTAGGCT GGGCATTATG GGGCAGTTTA GCATACAACA AAATGTTGTA CCGTACGGCT
AATTCAGAGG CAAAACCGAC ACTGTCTGAT ATGGCTACCA CGGAAGTATC ACGCTAA
 
Protein sequence
MAVNFFSLGT NSSEFSTKKT SNNLFQAIVI FSVISLLIMS LSRIGLSLWQ AERVSDAQGW 
GYILLQGLRV DFASLCWLWG IAALGTVVFA GEHLVGRVWL MILRVWLTLG LWVVVFLEAS
SPSFIAEYGF RPNRLYVEYL VYPKEVLSML WAGRKGELIL SALITVGTLW GGWWLSGKLT
QYIRFPKWYW RPVLAVIVIA ITVLGARSSL GHRPLNPSLV AFSDDPLVNS LVLNSSFSLI
FAIKQMSNEE DASKVYGKLA DEKVIDIVRR ESGRPLSAFT SSTIPTLSFN QASYTGKPKN
LVIILQESLG ARFVGSLGGL PLTPNIDELS QQGWFFENLY ATGTRSVRGI EAVTTGFTPT
PARAVVKLGK SQTGFFTIAD LLKQHGYTTQ FIYGGESHFD NMRSFFLGNG FTDIVDQGDY
KDPAFVASWG VSDEDLLFRA DEEFSRMHKE GKPFFSLVFS SSNHDPYEFP DDRIELYEQP
QYTMHNAVKY ADYAVGEFFK KAKKSDYWKD TLFLIVADHD SRVGGAALVP VSRFRIPGLI
LGDGIDAKRD PRVVSQIDMS PTLISLLGIS DSYPMLGRDL TKMPDSWPGR AMMQYDKNFG
LLEGDKMTIL QPELPPESVT YDFVTEKLTP TTLNEPQAEA ALGWALWGSL AYNKMLYRTA
NSEAKPTLSD MATTEVSR