| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0229 |
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| Symbol | |
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| ID | 4278662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 251511 |
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| End bp | 252884 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638132983 |
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| Product | fumarate lyase |
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| Protein accession | YP_748930 |
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| Protein GI | 114561417 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA TGCGTATAGA ATATGACAGT ATGGGAAAAG TACAGGTGCC AGATGATGTT
TATTATCAGG CGCAAACTCA ACGCGCACGA GATAACTTTC AGTTTTCTGA GCGGCGCTTT
CCGACGCCAG CGATACTCGC CCTACTCGAT ATAAAATCAG CTGCTGCACA GGCTAATAGC
CAACTCGGTT TATTAGATAG CGCCATGGCC AAAGCAATTC AACAAGCGAT TATCGCCGCT
AAGAAGCTTC ATTTTTCGCA GCATTTTCCG ATTGATTTGT TCCAAACAGG CTCTGGCACC
AGTTCTAATA TGAATGTTAA TGAAGTCATT GCCAGCCTCG CCAGCGATAT TTTGCAGGCA
AAGGTTCACC CTAATGATCA TGTCAATATG GGGCAAAGCA GTAACGATGT GGTGCCTGCC
TGTATTCATA TTAGTACGGT TAGGCAATTA AAGGGCTTAT TGTATCCGGC CATTAAGGGC
TTGAATGACA GATTAGCGTT TTTGGCCGAT GAGTATTCCA ATACAGTCAA AACTGGTCGC
ACCCATTTAA TGGACGCCAT GCCGATTACG CTTGGCCAAG AACTGCAATG TTGGCAACAA
CAGCTCAACA GTGCTCAAGC TCGAATTCAG CAAGTTGAGC TGAGCCTGCA TCAATTGCCA
TTGGGCGGCA CAGCGGTTGG CACTGGCGTT AATTGTGACC CCAATTTTGC CAAACTTGCA
TGTGATGATT TACAACAGCA AGATAAAATC CCTTGGCAGG CGGCGGTAAT GCCTGCGTTG
TATATGAGTA GCCAAGATCA CACCTTAGCC ATGGCTTCTG CGCTCAAAGG GTTAGCGGTT
ACGTTATTGA AAATAGCCAA TGATTTACGC TGGATGAACT CTGGCCCTGT AGCAGGGTTA
CAAGAAATTA GCTTAACGGC ACTGCAACCT GGCTCATCGA TAATGCCCGG TAAGGTTAAT
CCCGTTATCC CAGAAGCCGT AGCCATGATT GCCGCTGAAG TCATTGGCAA TGAAACTACC
ATTACCATCG CAGCACAATC GGGTAATTTT CAATTGAATG TGATGTTGCC ACTGATTGCC
GACAAGCTAC TGTCCAGTAT TGATTTATTA ACCCATGCCT GCCAGGCCAT GACCGACAAA
GTGTTTGCCG AGTTTCAACC CAATGTCGAG CATTTGACCC AGGCATTGGA GAAAAATCCG
ATTCTGGCTA CCGCGCTTAA TTCAGTGGTG GGTTACGATA TGGCCGCAAA AATTGCTAAA
CGTGCAGACA AAGAACATAA ATCAGTATTA GCCATTGCAC TTGAAGAAAC CGATTTGGAC
GAAGAGAAAC TCAAAGCGAT ACTCGACCCG TTGCATCTGG CAAAGCCGTA TTAA
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| Protein sequence | MSKMRIEYDS MGKVQVPDDV YYQAQTQRAR DNFQFSERRF PTPAILALLD IKSAAAQANS
QLGLLDSAMA KAIQQAIIAA KKLHFSQHFP IDLFQTGSGT SSNMNVNEVI ASLASDILQA
KVHPNDHVNM GQSSNDVVPA CIHISTVRQL KGLLYPAIKG LNDRLAFLAD EYSNTVKTGR
THLMDAMPIT LGQELQCWQQ QLNSAQARIQ QVELSLHQLP LGGTAVGTGV NCDPNFAKLA
CDDLQQQDKI PWQAAVMPAL YMSSQDHTLA MASALKGLAV TLLKIANDLR WMNSGPVAGL
QEISLTALQP GSSIMPGKVN PVIPEAVAMI AAEVIGNETT ITIAAQSGNF QLNVMLPLIA
DKLLSSIDLL THACQAMTDK VFAEFQPNVE HLTQALEKNP ILATALNSVV GYDMAAKIAK
RADKEHKSVL AIALEETDLD EEKLKAILDP LHLAKPY
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