Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0228 |
Symbol | |
ID | 4278661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 250509 |
End bp | 251321 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638132982 |
Product | regulatory protein RecX |
Protein accession | YP_748929 |
Protein GI | 114561416 |
COG category | [R] General function prediction only |
COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGTC CACCACTACG TCAAGCCAAA ACCATCGATA ACGTTTTTAA TAGTGCTTAT TGGCACCTTG GCCAGCAAGA CTTTACCATT AACGAAATTC GCACCAAGCT TGAGCGTAAA ACCGACAATC AACAATGGAT TGATACCGTA CTCGCCAGAC TCATCGAGGG CGGATATTTA AAAAGTGATT TTGACTTTGC GGTACGTTAC TGCGAGTTAG CTTTTAGTAA CGAAATCGGT ATCGGTGCCA TAAGGCGTAA GTTACAGCTG CGCGGCGTGA GTGCTACAGA GATTGATACC GCGATAGAAC AAGTGATGCA CGAGCAAACA GTGGACCTTT TTGAGTTAGC CACATCGCGA TTGCTGAGTC GGTTTGAAAA TTTCTATGGC ACCAACATAG AAAAAGTCTA TTCCCAGATG ACCACAAAAG GTTTCTCTCG AGCTGAAATT GATCACGCAT TAGCACAACA TCCACAACGT GAAACCCTGC GCAGTAAATT AGCCCTCAAA GCCGACAAAG CAGATTTAAC CACTGAAATA ATCAAGCTGT TTAATAAAGG CAAAGGTAAA ACTCTTATCT TGCAGGAATT GAAGCAGCGA CTGATTGATG TAAGCGACTT TGAAGAAACC TTGTACCAAC TAACGCTAAC AGAACATGTC GATTTTTATC AAAGCTGCAA AAATGAACTG GCTAAAAAAC GCTATAACTT AGCGGACTAT AAAGAAAAGT CGAAAGCGTA TGCCTATTTA TCCCGTAAAG GGTTTGGCAG TGATGAAATA AAAGAGGCAA TGACGCTAGA TGATGAGTCA TAA
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Protein sequence | MQRPPLRQAK TIDNVFNSAY WHLGQQDFTI NEIRTKLERK TDNQQWIDTV LARLIEGGYL KSDFDFAVRY CELAFSNEIG IGAIRRKLQL RGVSATEIDT AIEQVMHEQT VDLFELATSR LLSRFENFYG TNIEKVYSQM TTKGFSRAEI DHALAQHPQR ETLRSKLALK ADKADLTTEI IKLFNKGKGK TLILQELKQR LIDVSDFEET LYQLTLTEHV DFYQSCKNEL AKKRYNLADY KEKSKAYAYL SRKGFGSDEI KEAMTLDDES
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