Gene Sfri_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0210 
Symbol 
ID4278136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp232046 
End bp232852 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content44% 
IMG OID638132964 
Productaldo/keto reductase 
Protein accessionYP_748911 
Protein GI114561398 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTA TTCCATTGTT AGGCACAGGT ACCTTCAGAC TTAAAGATCA ACTGGCATTT 
GATTCAGTGT TAATGGCGCT AAAGCAGGGT TCTCGCCACA TTGATACCGC TCAGATTTAC
GCCAATGAGA AACAAGTTGG TGATGCAATT AACGCATCGG GTATCGCAAG AGCTGATATT
TTCCTCACCA CTAAGGTGTG GACAGATCGC TTTGCCCACG ACCAACTGAT TCAAAGCGTG
CATGACAGCT TGGCTTTATT GCAAACCGAC TATGTGGATT TGTTACTGAT ACATTGGCCC
TTACGTGATG ATTCTGTACC CATGCGAGAG TATTTGCTGG CATTAAAAGA AGTGCAAGGT
GCTGGTTTGG CGAAGCACAT TGGCGTGTCT AATTTCACTA TTGCCCAGGT GACACAAGCG
ATTGAGATTT TAGGTGCAGA CGCAATATTT ACCAATCAGG TTGAAGTACA TCCATATTTG
CAAAATAATC GACTGGTCAA ATTCTGTCAG CAGCACAATA TTATGGTTAC AGGTTATATG
CCGTTTGCCT ATGGTGCGGT ATTAACTGAT GACACTATTG TCGCGATTGC GAAAAAGCAT
CAAATGACAC CCGCTCAAGC GGTATTAGTG TGGATGCGTC AAAAAGGTTA TGTGACCATT
CCATCGTCAA CTAAGCTGGT AAATGTGCAA GCTAATATGG CCTCATTAGC GTTATCGCTT
CCGTCTGAAG ACATGGCGGC GATCAATAAA TTAGATCGAA ATCATCGTGT AGCTGCGCCA
GATTTTAGCC CTGATTGGGA TCAATAA
 
Protein sequence
MTTIPLLGTG TFRLKDQLAF DSVLMALKQG SRHIDTAQIY ANEKQVGDAI NASGIARADI 
FLTTKVWTDR FAHDQLIQSV HDSLALLQTD YVDLLLIHWP LRDDSVPMRE YLLALKEVQG
AGLAKHIGVS NFTIAQVTQA IEILGADAIF TNQVEVHPYL QNNRLVKFCQ QHNIMVTGYM
PFAYGAVLTD DTIVAIAKKH QMTPAQAVLV WMRQKGYVTI PSSTKLVNVQ ANMASLALSL
PSEDMAAINK LDRNHRVAAP DFSPDWDQ