| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0193 |
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| Symbol | |
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| ID | 4278119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 212208 |
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| End bp | 213113 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132947 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_748894 |
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| Protein GI | 114561381 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCACC TATTGTCGAT AAAAGAGTTA ACTCAATCTC AGCTTTTAGC CATCATTGAT
CTGGCTAAAA AAATTAAGAA TAACCCCGCT GAGTACCGTC GTGCTTTAGA TGGTAAAAGC
GTTGTGATGT TGTTTGAAAA GCCTTCACTG CGCACCCGAG TCAGCTTTGA CATTGGCATT
AATAAATTAG GTGGTCACTG CTTATACTTA GACCAACAAA ATGGCGCGTT AGGTCAGCGT
GAAACAGTAG CTGATTTTGC GACAAACATT TCATGCTGGG CCGATGCTAT TGTGGCAAGA
ACATACTCGC ACACCACCAT CGAGCAATTA GCTCAACATG GCAGCGTACC GGTCATTAAT
GCTTTATCTG ACTTGTATCA CCCATGCCAA GCTTTAGCTG ACTTTTTAAC ATTAGCTGAG
CAGTTTGATG ATGTAAGCCA AGCAAAACTG GCTTATGTTG GTGATGGTAA TAACGTCACT
CATTCATTGA TTTATGGTGC AGCGATTTTA GGCATGACCA TGACAGTGAT TTGTCCTGAA
GGGGCATTCC CTGATGCGCT AATCGTGACT GAAGCACAAG CGTTAGCAAA GCAAAATGGC
GGCAAGTTAA CCCTAAGCGC TGACATTAAT GCCATTGAAG GCCATGATGC TATTTACACC
GACACTTGGA TTTCTATGGG TGATGAAACA CCGCTTGCTG ATATTAAAGC CCGTTTTGCA
CCGTACCAAG TTAATAGCGA ACTAATGGCT CAAGCTGGCG CAAAATTCTT TATGCATTGC
TTACCAGCAC ATCGTGGTGT GGAAGTGACA GATGAAGTGA TGGATGGCGA AGGTTCATTG
ATTTTACATC AAGCAGAAAA CCGCATGCAT GCACAAAATG CAGTATTAGT GACCTTATTA
AGTTAG
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| Protein sequence | MQHLLSIKEL TQSQLLAIID LAKKIKNNPA EYRRALDGKS VVMLFEKPSL RTRVSFDIGI
NKLGGHCLYL DQQNGALGQR ETVADFATNI SCWADAIVAR TYSHTTIEQL AQHGSVPVIN
ALSDLYHPCQ ALADFLTLAE QFDDVSQAKL AYVGDGNNVT HSLIYGAAIL GMTMTVICPE
GAFPDALIVT EAQALAKQNG GKLTLSADIN AIEGHDAIYT DTWISMGDET PLADIKARFA
PYQVNSELMA QAGAKFFMHC LPAHRGVEVT DEVMDGEGSL ILHQAENRMH AQNAVLVTLL
S
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