| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0187 |
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| Symbol | |
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| ID | 4277589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 202404 |
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| End bp | 205463 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638132941 |
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| Product | hypothetical protein |
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| Protein accession | YP_748888 |
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| Protein GI | 114561375 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.382454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTAA TGGATGACGT AGCCACATTA AAAGCACAGC TGGCTGAGTT AGTCTCACAG
CAAGGTGCAC AACAGGCCGA TGTAAATCAG CAGTTAGCTA AATTCAGCCA GCAACTTGAT
GCTTTGGCCC TGCAAGTACA AGCGCAAAAC AACAATGAAC AACACATTAG CTTGGCTGAC
AAAAACTTAC ATGTTCCTGT GTATGAGAGT CGAGCAAACG ATTCGAGCGG CAATATCGTT
GCCGATAAAC CTCAATACTC TTCTTCCGCT TGGGAACGCC AACCGTTAGA CACAAATCAT
TCAGCGTCAG CGCCATCCAT AACAGCGCAA CAAACCTCGA TAGTCACAAA GTCACCAGCC
AGACAAAGTG CGCTAAGTGC CATGGTCTCT CAATTAGCTG AAGCTATTGG CGAATTCAGC
ACATCTGCGC TGGCACCATT GTCTGGGTTA ACCGAACAAG CAAAAAGCTT TTATCAACAT
TACCAAACTA AGGGTTTAGG TGCTGTATTT TTGATGACCG TTGCCGGCAT CATTACCCTG
ACACTTGGGT TTGGTTACTT ATTGCAGTTT TCTATTAACA ACTGGTTTTC AGAGCTGGGT
AAAGCGTTAT TAGGTTTAGG CGTAGCAAAT AGCATTATTG TCGGTGGTGT ATTCATTCGA
CAAAAACGAC CGGGCATGCA AGATTTTGGT TCAGGGCTTG TTGGTCTTGG GCTTATTCTT
AACTACTTGT GTTTGTATTT CTTAGGGCCG TATTTTCAGC TTATTCCCGA TACAGCCTGC
TTTGGTTTAC TGTTACTCAA CACCGTTTTT GGTTATGGTT TATCATTTAA ACTCGACACC
AAAGTGGTGG CCATTGTCGC CTTACTTGGT GGTTCACTTG CGCCATTGAT GTTACTTGAT
GGTGGTCAAA CACCATTATT GTACCTGCCG TATTTAATGC TTATCGGTAT CTGCTCGATG
GTACAAAGCC ACAAATTAGT TTGGCCGATA CTCATCGAAA TAACTGCATT ACTCCATATC
GCTTGCATAC AAATACTCAG CTTATTTATT CAATTGCCGC TGTCTGTCAT TGATTGGCAA
ACCGGCTTAG CATTATTGAT GATCAATGGG CTCTTCTACC TCTACGGTAT TGCCAGCTTA
TTATTTGTCA TCAAGTCTGC GTTAACACCA AGACTGCTAG CGGTTCCAAT CGCACTCATG
GTTTTTACTC TCTACACCCT AACGGAATGG AGTATTTTTG CTGGTGAGCT ATTTGCACTT
AATGCATTGC TGTGTGGGTT GTTATATTGG GTAATTAAAC GCGATAAAGA TATTAATGCA
CTTGCCTTGG CTTTTGCCGG AAGCTTTGCT GGTTTTGCCG CACTGTTTTT ACTCAGCGTC
GAACTGATGG GATTAGTGTT GTTATTAGAG GGATTATTGT TACTGTGGAT TGGCTGTAAA
CAACAATTTA ACCCTATTAG AGCAGAAGCT TATGTCTTGC TGATACTGGG CATAATCAGC
AGTTTTGCTA ACGTATTTGA TGTACTAACC CTGCCACACT ATGACAATAA TGGCTTATTA
GGGTATCAAG CATTATTGAG CTTATCGATG GCACTTACCT GTGCAATGAC TTTTGCAGCA
CAAAAGCTTC TTAGCCGCCA TCAAGCTGAT TTAATGACAT TTGAGCACCT AGCTGTACGG
TTTATCAGAG AGTTACTTGG AGTGCTTTAT ACGGTTACCT TATTACTCAT TAGCTTCTTT
ATCACTGAGC AATATTGGCT TAATACATTG CCATTAATCA GCTTATTACT ACTGTACATG
AGTGCTAAAC ACACCCTACG CTTTAGCGAA GTATTAGCCT GGATAGTGCA ACTGCCTCTA
CTAGGATTAG TGATTATTGG CATGGTAGAC GCCAATAGCT TGAGTTTTGC AGACCAAGCT
ATGAACGCTA AGTTAGCCCG TATCGAGCTC TTTACCGGAC TGTTACTCGC GTATTATTGG
TACAAAAAAT ATTACGCCGA CGCTAAGTTA ATCCGTTTTG CTTACTATGT TCAGTTGGCA
TGTTATTTAG CCTTACCATT GCTGCTATTA CCTAAAATCG TTCGTAGTTA TCCAGACTAT
ATTGCTATCG CATTATGGCT AAGCAGCCTC ATGAGCTTAG GATTAGCATA CCTTGTTAAT
CACAAGAGTC TTCGCTATGA GTCGCAAATA CTCACGGTAT TAGCAACCAT GGTTACAGCA
GCAATGTGTC TAGCAGAACT GTGGCAAGGA CTAATCGCAT TGGTGCTTGG TTTATCATTT
ATTGGGCTCA TTAGCTGGCG TTATACTCAG TTACCTGAGA AGTGGCAGCA AATGACTACG
CTTCAATGGC ATATTGGTCC ATATTATATT GCCTTAGTAA TCGCTGTATT GAGTCAAACA
GTTACGAACC TAATCCACCC ATCATGGGCA ATTACTGCTT TAATTATTTG CGGATATTTC
AGTGTGATTA CCGAAAGAAG CACTCGTATA GGTCGACATT TAAAGCAGGC CTTAGCACCT
AGTTATAGCT TGGCTTACAC GGCAATCTTT ATCTGTGCCA TTTTACCGAT TGTGCTTCAC
AGTGAAACAC AGCTGACGTT AAACATTAAT AGCTTACTGA TTAATTTAGC AGAGTTTGGA
GTGCTTGTTT TATTAGCTCG ATATTTACTA ACCGCTAAGT TAGGCATTAG AGCACACAGA
AAAATAGTCT CTCACAACGC ACTAAAATGG GCATGGCATG CTTTATTGGT AATAAGCTAT
TTACTCTGGA GTTACCAATT AGACACCAGC ATGGCTGCGC CAATGAGTGC AGTGTTATTA
GTAGTACATG CAAGTGCGGT GATGTTTATC AGTTTGAGAC CTCAACAAGC AAGCCTCGTC
AGGTTAGCGG CATTACTATT TACTTTAGCG TGTATCAAAG TGATTTTTGT AGATATGGCG
TCATTTGAAT TAATTCAAAA AATCGTCGCC TTTATTTTGA TTGGAGTGAT TTTACTAACG
GTTGCTTACT TTTATCAAAA AGCTAAAAAC AATCAATTGC CTGAAGACCT TACAGCCTAG
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| Protein sequence | MPLMDDVATL KAQLAELVSQ QGAQQADVNQ QLAKFSQQLD ALALQVQAQN NNEQHISLAD
KNLHVPVYES RANDSSGNIV ADKPQYSSSA WERQPLDTNH SASAPSITAQ QTSIVTKSPA
RQSALSAMVS QLAEAIGEFS TSALAPLSGL TEQAKSFYQH YQTKGLGAVF LMTVAGIITL
TLGFGYLLQF SINNWFSELG KALLGLGVAN SIIVGGVFIR QKRPGMQDFG SGLVGLGLIL
NYLCLYFLGP YFQLIPDTAC FGLLLLNTVF GYGLSFKLDT KVVAIVALLG GSLAPLMLLD
GGQTPLLYLP YLMLIGICSM VQSHKLVWPI LIEITALLHI ACIQILSLFI QLPLSVIDWQ
TGLALLMING LFYLYGIASL LFVIKSALTP RLLAVPIALM VFTLYTLTEW SIFAGELFAL
NALLCGLLYW VIKRDKDINA LALAFAGSFA GFAALFLLSV ELMGLVLLLE GLLLLWIGCK
QQFNPIRAEA YVLLILGIIS SFANVFDVLT LPHYDNNGLL GYQALLSLSM ALTCAMTFAA
QKLLSRHQAD LMTFEHLAVR FIRELLGVLY TVTLLLISFF ITEQYWLNTL PLISLLLLYM
SAKHTLRFSE VLAWIVQLPL LGLVIIGMVD ANSLSFADQA MNAKLARIEL FTGLLLAYYW
YKKYYADAKL IRFAYYVQLA CYLALPLLLL PKIVRSYPDY IAIALWLSSL MSLGLAYLVN
HKSLRYESQI LTVLATMVTA AMCLAELWQG LIALVLGLSF IGLISWRYTQ LPEKWQQMTT
LQWHIGPYYI ALVIAVLSQT VTNLIHPSWA ITALIICGYF SVITERSTRI GRHLKQALAP
SYSLAYTAIF ICAILPIVLH SETQLTLNIN SLLINLAEFG VLVLLARYLL TAKLGIRAHR
KIVSHNALKW AWHALLVISY LLWSYQLDTS MAAPMSAVLL VVHASAVMFI SLRPQQASLV
RLAALLFTLA CIKVIFVDMA SFELIQKIVA FILIGVILLT VAYFYQKAKN NQLPEDLTA
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