| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0088 |
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| Symbol | |
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| ID | 4278260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 101802 |
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| End bp | 102923 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638132829 |
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| Product | ABC transporter related |
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| Protein accession | YP_748789 |
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| Protein GI | 114561276 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCCAC ACAACGCTGA CCTTATATGT GATATTTCAC AAACATTGCC TATTCCATTG
GAAGCTCATT TCAGTTGTCG GGCTGGTGAA GTGCTAGCCG TGGTTGGCCC TTCTGGTGGC
GGTAAAACGA CTTTGCTGAG AATGATTGCC GGTTTGAGTT TACCTCAACG GGGCCACATT
CATTGTGGTG ATAGATTATG GTTTGATGCA AAGCAGTCTA TTTCGTTAAC TCCCCAGCAG
CGGCATATCG GTTATATGCC ACAACATTTC GGTCTGTTCC CACATTTATC TGCACTCGAC
AATGTTATTT CTGGGCTTGA TCATGTGCCA AAAGAATTAC GAAAGCAGCG AGCATTAGAT
TGGTTAGAAC GTGTCAATTT ACATGGGTTG CCTGATCGTT TACCCGCGCA ATTGTCTGGC
GGACAACGTC AACGAGTTGC GCTAGCCCGT GCTCTGGCAC GTGAGCCAGC TATCTTACTG
TTAGATGAAC CCTTTTCTGC AGTAGACCGC GAAACCCGTG AACGCTTGTA TATTGAGTTA
GCTCGCTTAA AACAGCAATT GTCTATCCCG GTGGTCATGG TAACGCATGA CATCCATGAG
GCATTGCTAT TGGCTGATAA GATGATACTT ATTAGTCAGG GCCAAATGCT GCAACAAGGC
AAACCATTTG AGGTGTTATC TCATCCCAAT AACGAAGCGG TTGCACGGCA AATGGGCTTG
AGGAATATTT TTGACGGTCA AGTTGTATCG CAAGATATTG AACGTAATAT GACCCAGTTT
ACGCTGGGTG ATGAATTGAT TGTCAGCGAC AGTGCACCAG CATTAACTGT CGGCCAATCT
ATCCGTTGGG TTATTCCAAA CCAAGGTATT CGTTTTAACG CCATTAGCAG CGGTCGTCTG
TGTAAAAGCT TAAATAAATT AGAAGTATTA ATTGAGTCTG TGTTGGTGAT GGGTGAATCG
TCACGAGTGA TAGCGTCAGT TGTAGGCATT GGATCTATTA TCAATGCAGA TGTGCCGACA
CATTTAGTCC ATAAGTTAGC CTTAGCGCCA GGAGTGCAAA CGACTATTGC GCTTAAGTCA
GATCAAATTC ATATTTTAAG TGCACAGTCT GAACTCGGAT AA
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| Protein sequence | MVPHNADLIC DISQTLPIPL EAHFSCRAGE VLAVVGPSGG GKTTLLRMIA GLSLPQRGHI
HCGDRLWFDA KQSISLTPQQ RHIGYMPQHF GLFPHLSALD NVISGLDHVP KELRKQRALD
WLERVNLHGL PDRLPAQLSG GQRQRVALAR ALAREPAILL LDEPFSAVDR ETRERLYIEL
ARLKQQLSIP VVMVTHDIHE ALLLADKMIL ISQGQMLQQG KPFEVLSHPN NEAVARQMGL
RNIFDGQVVS QDIERNMTQF TLGDELIVSD SAPALTVGQS IRWVIPNQGI RFNAISSGRL
CKSLNKLEVL IESVLVMGES SRVIASVVGI GSIINADVPT HLVHKLALAP GVQTTIALKS
DQIHILSAQS ELG
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