| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0076 |
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| Symbol | |
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| ID | 4278160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 90025 |
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| End bp | 91362 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638132817 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_748777 |
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| Protein GI | 114561264 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAA TTATTCAATC AGCCAGCCAA GAGTTGATTA AACCTTATCA ATCTAATATT
ACCGTCCCCA ATTGGATGAT CAGCTCTATG GAGCGGGTGA TGCAGTATTA TGTTGATAAA
AATTTACGTC TAGACACCAT TTCTACAGAC CGTATGCCTA AACCTGTTGA AGGCAAAAAG
TACATGTTGT ATGCCCACAT TCCGTTTTGT CATACCTTGT GCTCGTTTTG TACTTTTCAC
CGTTTTTTAT TCCGTGAAGA CAAAGCACGC GAATACTTTG TCGCGCTGCG CAAAGAGATG
CAAATGGCCA AAGATTTGGG CTATGAGTTT GAGTCTATGT ACATTGGCGG CGGCACGACT
ACTGTGCTTG AAGACGAGTT AGCTCGTACC ATCGAGCATG CAAAAAATCT GTTTCCTGGC
ATTAAAGAAG TGTCTTGTGA GTCTGATCCA CAACATTTAG CCAGCCCTGA ATTTAAGCAA
TTAAAAGGCC TAGTAGACAG AATGTCGATT GGGGTACAAA GCTTTGACGA TGGCATTTTA
AAAATGACCG ATCGCTTAGA CAAGTTTGGC TCTGGCCAAC AAACCTTTGA CCGCATTATG
GCGGCAAAAG AATTGTTTCC GATCATCAAT GTCGACCTCA TTTTCGGTTT CCGTGGTCAA
ACGGATGAGA TTATTCAGTC GGATCTTGAA ATGGCTTCTA AGCTCGACCC TCGCCAAATT
ACCACGTATC CATTGATGAT TACCCACCAG ACCCGTAAAA GCGTCAAAGG TCAGTTAGCT
GCACCTCATG GTGACATGGT GAATCAGTAT CGACAGATTT TAAATCACTT AACGGGGCAA
TATACACAAT TGTCGGCTTG GGCGTTTGGT AAAACCAATG ATGAAGGTTT TGATGAGTAT
GTTATTGATT ATGATGAATA TCTCGGTGTC GGTTCTGGCT CGTTTAGTTT TTTAAATGAC
ACCCTATACG TGAATACATT TTCACTGAAA AAATACCAAC AACGTATTGC TGAAGGTCGT
ATGGCAGTTG AGCAACAGAA AAAATATCAA TTAAAAGAAG TGATGCAATA TCGCTTTTTA
TTAGGAATGT TTTCGGGGCG TTTATCGCGT AAATATTTCC GTGACACTTT TAACGTTAAT
TTAGACACTG CGTTGTTTAA AGAAATGACC TCAATGAAAG CCATGGGAGC CCTTAAAAAT
GACCCGGTTA ATCCAGACGA ATTGATCGTA ACCGATAATG GCAAAATGTT GGGGTTGTTG
ATGATGAAGG AGTTTTACTC TGGTATGGAC AATGTGCGCG CCCAATTACG ACAACCACTT
GGCGCAACTG ATATGTAA
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| Protein sequence | MSSIIQSASQ ELIKPYQSNI TVPNWMISSM ERVMQYYVDK NLRLDTISTD RMPKPVEGKK
YMLYAHIPFC HTLCSFCTFH RFLFREDKAR EYFVALRKEM QMAKDLGYEF ESMYIGGGTT
TVLEDELART IEHAKNLFPG IKEVSCESDP QHLASPEFKQ LKGLVDRMSI GVQSFDDGIL
KMTDRLDKFG SGQQTFDRIM AAKELFPIIN VDLIFGFRGQ TDEIIQSDLE MASKLDPRQI
TTYPLMITHQ TRKSVKGQLA APHGDMVNQY RQILNHLTGQ YTQLSAWAFG KTNDEGFDEY
VIDYDEYLGV GSGSFSFLND TLYVNTFSLK KYQQRIAEGR MAVEQQKKYQ LKEVMQYRFL
LGMFSGRLSR KYFRDTFNVN LDTALFKEMT SMKAMGALKN DPVNPDELIV TDNGKMLGLL
MMKEFYSGMD NVRAQLRQPL GATDM
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